C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448118 RPL5P9-001 ENSG00000236330 9606 + 2:110967834-110968719 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000448118
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000448118 0.027±0.00 0.056±0.00 0.067±0.00 0.204±0.00 0.013±0.00 0.041±0.00 0.097±0.06 0.636±0.57 0.050±0.00 0.243±0.12 0.105±0.00 0.218±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047T CIL_00047T_0001 CGP 2:110637698-111118222
CIL_00047S CIL_00047S_0001 CGP 2:110732573-111168447

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1031
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1031
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1031
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 987
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 732
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 614
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 424
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000121897 Gm15877-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 213

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