C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449483 RP11-175P19.2-002 ENSG00000236297 9606 - 3:193579001-193593090 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartMusclePlacentaTestisENST00000449483
Transcript ID Adrenal Colon Heart Muscle Placenta Testis
ENST00000449483 0.210±0.00 0.218±0.00 0.051±0.00 0.016±0.00 0.294±0.01 0.372±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N5 CIL_0000N5_0001 CGP 3:193274790-193593111
CIL_0000N8 CIL_0000N8_0001 CGP 3:193402077-193697823
CIL_0008CV CIL_0008CV_0001 VISTA 3:193471570-194073544

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 326
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 315
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 315
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 311
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 311
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 235

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