C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15a pseudogene 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472521 RPS15AP16-001 ENSG00000239483 9606 - 3:128798841-128799201 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000472521
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000472521 0.107±0.00 0.264±0.00 0.473±0.33 0.035±0.00 0.879±0.00 2.265±0.00 1.045±1.01 0.203±0.08 1.146±0.87 0.864±0.84 0.230±0.00 0.234±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182051 Gm26983-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000172457 Rps15a-201 protein_coding Mus_musculus 4.99983e-42 174
ENSMUST00000106588 Rps15a-004 protein_coding Mus_musculus 4.99983e-42 174
ENSMUST00000131374 Rps15a-001 protein_coding Mus_musculus 4.99983e-42 174
ENSMUST00000117476 Rps15a-ps6-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000132586 Rps15a-ps5-001 processed_pseudogene Mus_musculus 5e-37 158
ENSMUST00000087473 Rps15a-ps2-001 processed_pseudogene Mus_musculus 1e-33 147
ENSMUST00000121072 Rps15a-ps3-001 processed_pseudogene Mus_musculus 5e-32 141
ENSDART00000128613 rps15a-001 protein_coding Danio_rerio 1e-23 113
ENSDART00000018822 rps15a-002 retained_intron Danio_rerio 0.000000000001 77

Loading