C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15A, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132586 Rps15a-ps5-001 ENSMUSG00000067058 10090 - 5:105797321-105797713 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000132586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000132586 0.368±0.27 0.763±0.00 0.372±0.24 0.511±0.00 0.820±0.00 0.332±0.00 0.349±0.08 0.377±0.22 0.258±0.06 0.817±0.14 0.091±0.00 0.676±0.25 0.302±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069B CIL_00069B_0002 CGP 5:105699969-105915818

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322989 RPS15A-001 protein_coding Homo_sapiens 0 431
ENST00000398713 RP11-793K1.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000403958 RP3-340B19.2-001 processed_pseudogene Homo_sapiens 0 385
ENST00000413110 RPS15AP38-001 processed_pseudogene Homo_sapiens 0 364
ENST00000436276 RPS15AP5-001 processed_pseudogene Homo_sapiens 0 322
ENST00000439856 RPS15AP9-001 processed_pseudogene Homo_sapiens 0 324
ENST00000449183 RPS15AP27-001 processed_pseudogene Homo_sapiens 0 211
ENST00000470598 RPS15AP17-001 processed_pseudogene Homo_sapiens 0 339
ENST00000472521 RPS15AP16-001 processed_pseudogene Homo_sapiens 5e-37 158
ENST00000489168 RPS15AP25-001 processed_pseudogene Homo_sapiens 0 294
ENST00000492525 RPS15AP24-001 processed_pseudogene Homo_sapiens 0 399
ENST00000562935 RPS15A-004 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000563390 RPS15A-002 protein_coding Homo_sapiens 0 431
ENST00000563579 RPS15A-007 protein_coding Homo_sapiens 5e-31 137
ENST00000565420 RPS15A-005 protein_coding Homo_sapiens 0 431
ENST00000569365 RPS15A-011 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000572008 RPS15A-013 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000574723 RPS15A-009 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000575669 RPS15A-003 processed_transcript Homo_sapiens 7e-30 137
ENST00000576008 RPS15A-010 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000576436 RPS15A-012 protein_coding Homo_sapiens 4e-30 137

Loading