C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473114 RP11-333A23.2-001 ENSG00000241105 9606 - 8:70506251-70506818 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeTestisENST00000473114
Transcript ID Adipose Testis
ENST00000473114 0.059±0.00 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BN CIL_0003BN_0001 CGP 8:70109762-70608387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120234 Gm12918-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000000756 Rpl13-001 protein_coding Mus_musculus 0 303
ENSMUST00000121821 Gm15710-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000079761 Gm10071-201 processed_pseudogene Mus_musculus 0 298
ENSMUST00000104990 Gm7290-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000079960 Rpl13-ps3-201 protein_coding Mus_musculus 0 244
ENSMUST00000132275 Rpl13-004 retained_intron Mus_musculus 0 233
ENSMUST00000119124 Gm15131-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000121199 Gm12466-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000117813 Rpl13-ps5-001 processed_pseudogene Mus_musculus 2.8026e-45 185
ENSMUST00000129311 Rpl13-002 retained_intron Mus_musculus 4.06377e-44 182
ENSMUST00000119734 Gm12011-001 processed_pseudogene Mus_musculus 6.99949e-42 174

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