C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pre-B-cell leukemia homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478678 PBX2-002 ENSG00000204304 9606 - 6:32186973-32189942 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryTestisENST00000478678
Transcript ID Breast Ovary Testis
ENST00000478678 2.084±0.00 6.767±3.73 5.799±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038149 Pbx2-001 protein_coding Mus_musculus 0 1448
ENSMUST00000183827 Pbx2-005 protein_coding Mus_musculus 0 1157
ENSMUST00000173328 Pbx2-002 protein_coding Mus_musculus 0 1086
ENSDART00000129503 pbx1b-203 protein_coding Danio_rerio 0 671
ENSDART00000122028 pbx1b-201 protein_coding Danio_rerio 0 671
ENSDART00000125538 pbx1b-202 protein_coding Danio_rerio 0 671
ENSMUST00000174532 Pbx2-003 protein_coding Mus_musculus 0 649
ENSDART00000004751 pbx2-201 protein_coding Danio_rerio 0 488
ENSDART00000130045 pbx2-202 protein_coding Danio_rerio 0 488
ENSMUST00000081503 Pbx4-004 protein_coding Mus_musculus 0 462
ENSDART00000157364 pbx2-001 protein_coding Danio_rerio 0 311
ENSMUST00000134777 Pbx4-001 nonsense_mediated_decay Mus_musculus 6e-31 139
ENSMUST00000132899 Pbx4-003 nonsense_mediated_decay Mus_musculus 6e-31 139
ENSMUST00000131637 Pbx4-007 protein_coding Mus_musculus 2e-30 137
ENSMUST00000156319 Pbx4-002 nonsense_mediated_decay Mus_musculus 2e-30 137
ENSMUST00000151975 Pbx4-005 retained_intron Mus_musculus 2e-30 137

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