C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481963 RPL7AP8-001 ENSG00000230507 9606 - 10:86630825-86631628 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMusclePlacentaTestisENST00000481963
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Placenta Testis
ENST00000481963 0.209±0.00 0.176±0.00 0.295±0.00 0.024±0.00 0.069±0.00 0.026±0.00 0.076±0.00 0.109±0.00 0.038±0.00 0.137±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000119589 Gm16071-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000184700 Gm7863-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000119952 Gm15836-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000118291 Gm16166-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000177515 Gm20660-001 processed_pseudogene Mus_musculus 1e-26 124

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