C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7863
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184700 Gm7863-001 ENSMUSG00000099253 10090 + 9:72128587-72129391 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000184700
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000184700 0.237±0.00 0.022±0.00 0.060±0.01 0.121±0.06 0.048±0.00 0.060±0.06 0.067±0.01 0.046±0.00 0.548±0.79 0.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 579
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 545
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 678
ENST00000413552 AC003080.4-001 processed_pseudogene Homo_sapiens 0 435
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 684
ENST00000425027 RP11-55K22.2-001 transcribed_processed_pseudogene Homo_sapiens 0 501
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 695
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 684
ENST00000433508 RP11-452D2.1-001 processed_pseudogene Homo_sapiens 0 250
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 684
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 566
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 689
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 684
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 684
ENST00000464513 RPL7AP28-001 processed_pseudogene Homo_sapiens 0 230
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 641
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 773
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 617
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 540
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000574864 RP11-55K22.2-002 processed_transcript Homo_sapiens 0 501

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