C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17826
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189720 RP23-321G17.2-001 ENSMUSG00000099423 10090 + 7:16498732-16499529 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000189720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000189720 0.162±0.09 0.202±0.11 0.120±0.01 0.279±0.13 0.443±0.21 0.332±0.23 0.209±0.07 0.160±0.11 0.152±0.10 0.289±0.15 0.124±0.00 0.292±0.14 0.175±0.18 0.307±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411
CIL_00062F CIL_00062F_0002 CGP 7:16455721-16614993

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 662
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 568
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 725
ENST00000413552 AC003080.4-001 processed_pseudogene Homo_sapiens 0 553
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000425027 RP11-55K22.2-001 transcribed_processed_pseudogene Homo_sapiens 0 593
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 756
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 750
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 604
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 750
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 749
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 773
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 749
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 669
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 348
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 863
ENST00000480271 RP11-494M8.1-001 processed_pseudogene Homo_sapiens 0 427
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 719
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 797
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 628
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 795
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 512
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 627
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 453
ENST00000557949 RP11-356M20.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000574864 RP11-55K22.2-002 processed_transcript Homo_sapiens 0 593
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 857

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