C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8870
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188170 RP23-248N10.1-001 ENSMUSG00000101551 10090 - 1:71155246-71156020 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000188170
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000188170 0.137±0.06 0.022±0.00 0.253±0.11 0.111±0.00 0.076±0.03 0.193±0.04 0.039±0.03 0.100±0.02 0.279±0.23 0.070±0.05 0.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AP CIL_0000AP_0003 CGP 1:71027498-71414910

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 492
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 580
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 597
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 597
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 580
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 580
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 411
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 597
ENST00000446956 RPL7AP15-001 processed_pseudogene Homo_sapiens 0 409
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 580
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 580
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 558
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 523
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 547
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 2.00386e-43 180
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 492
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 388
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 388
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 477
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 311

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