C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16198
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118766 Gm16198-001 ENSMUSG00000084343 10090 + 3:152153447-152154116 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000118766
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118766 0.080±0.00 0.020±0.01 0.300±0.14 0.920±0.32 0.320±0.14 0.045±0.04 0.211±0.00 0.071±0.00 0.128±0.00 0.646±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 403
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 649
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 479
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000424559 AC000089.3-001 processed_pseudogene Homo_sapiens 0 604
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 412
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 521
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 252
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 649
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 590
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 525
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 523
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 255
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 621
ENST00000480271 RP11-494M8.1-001 processed_pseudogene Homo_sapiens 6e-39 165
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 497
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 601
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 497
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 571
ENST00000489392 RPL7A-007 processed_transcript Homo_sapiens 0 641
ENST00000492798 RPL7A-008 processed_transcript Homo_sapiens 6e-26 121
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 449
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 346
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 632

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