C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5259
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191231 RP24-217I2.2-001 ENSMUSG00000102083 10090 - 1:89256182-89256981 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverOvaryPlacentaENSMUST00000191231
Transcript ID Bladder Brain Kidney Liver Ovary Placenta
ENSMUST00000191231 0.024±0.00 0.006±0.00 0.053±0.00 0.007±0.00 0.158±0.09 0.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R3 CIL_0003R3_0002 CGP 1:89070415-89897617

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 4.2039e-45 185
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 891
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 658
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 575
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 725
ENST00000417266 RPL7AP72-001 processed_pseudogene Homo_sapiens 0 348
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 671
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 431
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 531
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 767
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 523
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 702
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 734
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 616
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000446956 RPL7AP15-001 processed_pseudogene Homo_sapiens 0 588
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 375
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 739
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 769
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 697
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 734
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 536
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 887
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 763
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 721
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 719
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 710
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 357
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 857
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 713
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 821
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 590
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 448
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 610
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 784
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 697
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 532
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 628
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 226
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 795
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 621
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 444
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 857

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