C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sodium channel, voltage-gated, type III, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484898 SCN3A-008 ENSG00000153253 9606 - 2:165122800-165127792 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000484898
Transcript ID Placenta
ENST00000484898 0.241±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CP CIL_0006CP_0001 CGP 2:164896186-165204067
CIL_0006CO CIL_0006CO_0001 CGP 2:165087522-165392308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112371 Scn1a-201 protein_coding Mus_musculus 0 189
ENSMUST00000094951 Scn1a-005 protein_coding Mus_musculus 0 189
ENSMUST00000077489 Scn1a-004 protein_coding Mus_musculus 0 189
ENSMUST00000156865 Scn1a-003 processed_transcript Mus_musculus 0 189
ENSMUST00000112366 Scn1a-001 protein_coding Mus_musculus 0 189
ENSMUST00000100067 Scn2a1-201 protein_coding Mus_musculus 5.60519e-45 183
ENSMUST00000028377 Scn2a1-001 protein_coding Mus_musculus 5.60519e-45 183

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