Transcript ID | Brain |
---|---|
ENSMUST00000112371 | 1.577±1.47 |
Transcript Info |
||||||
Description: | sodium channel, voltage-gated, type I, alpha | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000112371 | Scn1a-201 | ENSMUSG00000064329 | 10090 | - | 2:66270782-66440837 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_00087V | CIL_00087V_0002 | VISTA | 2:65692128-66294633 |
CIL_0006CL | CIL_0006CL_0002 | CGP | 2:66184327-66440840 |
CIL_0006CK | CIL_0006CK_0002 | CGP | 2:66270781-66634962 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001508 | IMP | action potential |
GO:0001518 | IEA | voltage-gated sodium channel complex |
GO:0005248 | IMP | voltage-gated sodium channel activity |
GO:0006814 | IMP | sodium ion transport |
GO:0007628 | IMP | adult walking behavior |
GO:0014704 | IDA | intercalated disc |
GO:0016020 | IDA | membrane |
GO:0019227 | IMP | neuronal action potential propagation |
GO:0019228 | IMP | neuronal action potential |
GO:0030018 | IDA | Z disc |
GO:0030315 | IDA | T-tubule |
GO:0030424 | IDA | axon |
GO:0033268 | IDA | node of Ranvier |
GO:0034706 | IPI | sodium channel complex |
GO:0034765 | IEA | regulation of ion transmembrane transport |
GO:0035725 | IEA | sodium ion transmembrane transport |
GO:0042391 | IMP | regulation of membrane potential |
GO:0043025 | IDA | neuronal cell body |
GO:0043194 | IDA | axon initial segment |
GO:0050884 | IMP | neuromuscular process controlling posture |
GO:0086010 | IBA | membrane depolarization during action potential |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000090994 | scn1lab-201 | protein_coding | Danio_rerio | 0 | 1247 |
ENSDART00000151247 | scn1lab-001 | protein_coding | Danio_rerio | 0 | 1247 |
ENSDART00000106534 | scn4aa-001 | protein_coding | Danio_rerio | 0 | 784 |
ENSDART00000097722 | SCN11A-201 | protein_coding | Danio_rerio | 0 | 641 |
ENSDART00000083256 | scn12aa-201 | protein_coding | Danio_rerio | 0 | 614 |
ENSDART00000022761 | scn8ab-201 | protein_coding | Danio_rerio | 0 | 569 |
ENSDART00000151299 | scn8ab-001 | protein_coding | Danio_rerio | 0 | 569 |
ENSDART00000011718 | scn1a-201 | protein_coding | Danio_rerio | 0 | 381 |
ENSDART00000090979 | scn1a-202 | protein_coding | Danio_rerio | 0 | 381 |
ENST00000283254 | SCN3A-001 | protein_coding | Homo_sapiens | 0 | 4643 |
ENST00000283256 | SCN2A-001 | protein_coding | Homo_sapiens | 0 | 5060 |
ENST00000302328 | SCN11A-001 | protein_coding | Homo_sapiens | 0 | 254 |
ENST00000303354 | SCN9A-201 | protein_coding | Homo_sapiens | 0 | 1744 |
ENST00000303395 | SCN1A-001 | protein_coding | Homo_sapiens | 0 | 6837 |
ENST00000333535 | SCN5A-014 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000354534 | SCN8A-001 | protein_coding | Homo_sapiens | 0 | 1483 |
ENST00000360093 | SCN3A-201 | protein_coding | Homo_sapiens | 0 | 4554 |
ENST00000375405 | SCN1A-002 | protein_coding | Homo_sapiens | 0 | 9596 |
ENST00000375427 | SCN2A-002 | protein_coding | Homo_sapiens | 0 | 4977 |
ENST00000375437 | SCN2A-201 | protein_coding | Homo_sapiens | 0 | 5060 |
ENST00000409050 | SCN1A-003 | protein_coding | Homo_sapiens | 0 | 5173 |
ENST00000409101 | SCN3A-002 | protein_coding | Homo_sapiens | 0 | 3081 |
ENST00000409435 | SCN9A-004 | protein_coding | Homo_sapiens | 0 | 1744 |
ENST00000409672 | SCN9A-001 | protein_coding | Homo_sapiens | 0 | 1744 |
ENST00000413689 | SCN5A-001 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000414099 | SCN5A-004 | protein_coding | Homo_sapiens | 0 | 706 |
ENST00000423058 | SCN1A-201 | protein_coding | Homo_sapiens | 0 | 6841 |
ENST00000423572 | SCN5A-003 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000424833 | SCN2A-003 | protein_coding | Homo_sapiens | 0 | 1293 |
ENST00000425664 | SCN5A-201 | protein_coding | Homo_sapiens | 0 | 706 |
ENST00000435607 | SCN4A-201 | protein_coding | Homo_sapiens | 0 | 558 |
ENST00000440431 | SCN3A-004 | protein_coding | Homo_sapiens | 0 | 1519 |
ENST00000443581 | SCN5A-202 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000444237 | SCN11A-002 | protein_coding | Homo_sapiens | 0 | 254 |
ENST00000449557 | SCN5A-010 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000450102 | SCN5A-008 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000451551 | SCN5A-203 | protein_coding | Homo_sapiens | 0 | 737 |
ENST00000452182 | SCN9A-003 | protein_coding | Homo_sapiens | 0 | 455 |
ENST00000453007 | SCN3A-003 | protein_coding | Homo_sapiens | 0 | 628 |
ENST00000454569 | SCN9A-002 | protein_coding | Homo_sapiens | 0 | 455 |
ENST00000455624 | SCN5A-002 | protein_coding | Homo_sapiens | 0 | 483 |
ENST00000456224 | SCN11A-003 | protein_coding | Homo_sapiens | 0 | 254 |
ENST00000465043 | SCN3A-007 | processed_transcript | Homo_sapiens | 0 | 265 |
ENST00000473295 | SCN1A-005 | retained_intron | Homo_sapiens | 0 | 348 |
ENST00000480032 | SCN2A-005 | retained_intron | Homo_sapiens | 0 | 3057 |
ENST00000484898 | SCN3A-008 | processed_transcript | Homo_sapiens | 0 | 189 |
ENST00000486878 | SCN2A-004 | retained_intron | Homo_sapiens | 0 | 427 |
ENST00000491429 | SCN1A-004 | retained_intron | Homo_sapiens | 0 | 566 |
ENST00000507401 | SCN1A-007 | retained_intron | Homo_sapiens | 0 | 473 |
ENST00000550891 | SCN8A-003 | protein_coding | Homo_sapiens | 0 | 512 |
ENST00000551216 | SCN8A-004 | protein_coding | Homo_sapiens | 0 | 348 |
ENST00000578147 | SCN4A-001 | protein_coding | Homo_sapiens | 0 | 558 |
ENST00000599343 | SCN8A-202 | protein_coding | Homo_sapiens | 0 | 1483 |