C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15a pseudogene 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492525 RPS15AP24-001 ENSG00000241511 9606 - 8:30117384-30117779 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492525
Transcript ID Adrenal Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492525 0.265±0.00 0.216±0.05 0.479±0.00 0.188±0.00 0.033±0.00 0.071±0.00 0.096±0.00 0.095±0.00 0.126±0.00 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0001 VISTA 8:29977526-30581393
CIL_0008IH CIL_0008IH_0001 VISTA 8:30111104-30714589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172457 Rps15a-201 protein_coding Mus_musculus 0 427
ENSMUST00000106588 Rps15a-004 protein_coding Mus_musculus 0 427
ENSMUST00000131374 Rps15a-001 protein_coding Mus_musculus 0 427
ENSMUST00000117476 Rps15a-ps6-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000087473 Rps15a-ps2-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000182051 Gm26983-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000132586 Rps15a-ps5-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000121072 Rps15a-ps3-001 processed_pseudogene Mus_musculus 0 394
ENSDART00000128613 rps15a-001 protein_coding Danio_rerio 0 355
ENSDART00000018822 rps15a-002 retained_intron Danio_rerio 4e-38 161

Loading