C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498412 RP1-102E24.1-001 ENSG00000213942 9606 - 12:6409637-6410013 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000498412
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000498412 0.220±0.00 0.421±0.00 0.049±0.00 0.095±0.00 0.397±0.00 0.306±0.00 0.434±0.00 0.086±0.00 0.183±0.00 0.083±0.00 0.585±0.46 0.296±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 442
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 442
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 442
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000080982 Rpl31-ps20-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 403
ENSMUST00000180629 Rpl31-ps7-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000079114 Rpl31-ps4-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000180885 Rpl31-ps18-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000180929 Rp31-ps19-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000181182 Rpl31-ps21-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000118086 Rpl31-ps5-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000117961 Rpl31-ps22-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000191562 RP24-82I5.2-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000191416 RP23-416O18.2-001 processed_pseudogene Mus_musculus 0 257

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