C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079114 Rpl31-ps4-001 ENSMUSG00000090753 10090 - 16:87549062-87549451 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaTestisENSMUST00000079114
Transcript ID Bladder Brain Liver Placenta Testis
ENSMUST00000079114 14.391±0.00 1.438±0.00 6.241±1.01 0.130±0.05 0.912±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MN CIL_0000MN_0003 CGP 16:87483326-87595336

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 446
ENST00000406329 RPL31P28-001 processed_pseudogene Homo_sapiens 0 267
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 322
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 377
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 379
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 377
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 381
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 322
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 446
ENST00000413849 RPL31P2-001 processed_pseudogene Homo_sapiens 0 353
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000422565 RPL31P63-001 processed_pseudogene Homo_sapiens 0 387
ENST00000422587 RPL31P12-001 processed_pseudogene Homo_sapiens 0 217
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 368
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 307
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 353
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 398
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 315
ENST00000441577 RP11-560I19.2-001 processed_pseudogene Homo_sapiens 0 329
ENST00000447680 RP11-346D6.4-001 processed_pseudogene Homo_sapiens 0 346
ENST00000448339 RPL31P7-001 processed_pseudogene Homo_sapiens 0 359
ENST00000449702 AC104306.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 359
ENST00000455434 RP11-420H19.3-001 processed_pseudogene Homo_sapiens 0 307
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 377
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 344
ENST00000471002 RPL31P50-001 processed_pseudogene Homo_sapiens 0.00000000001 73
ENST00000474343 RP11-166B14.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000480540 RP11-112J1.1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 0 237
ENST00000490759 RPL31P49-001 processed_pseudogene Homo_sapiens 0 351
ENST00000491087 RPL31P56-001 processed_pseudogene Homo_sapiens 0 202
ENST00000496160 RPL31P61-001 processed_pseudogene Homo_sapiens 0 366
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000518463 RP11-267M23.6-001 processed_pseudogene Homo_sapiens 0 267
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 350
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 350

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