C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504072 CTD-2218G20.1-001 ENSG00000251062 9606 - 5:32887990-32888145 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000504072
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000504072 0.203±0.00 0.540±0.00 0.322±0.00 0.649±0.00 0.890±0.00 0.094±0.00 0.848±0.00 0.561±0.00 0.300±0.00 0.504±0.00 0.571±0.00 0.472±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 206
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 200
ENSMUST00000160969 Gm15795-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000119731 Gm4986-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000117614 Gm11531-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 2.8026e-45 183
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 9.80909e-45 182
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 6e-37 156

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