C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group box 3 pseudogene 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507326 HMGB3P15-001 ENSG00000250897 9606 - 4:94195940-94196513 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENST00000507326
Transcript ID Heart Testis
ENST00000507326 0.022±0.00 0.584±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BX CIL_0005BX_0002 CGP 4:93828753-94291292

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 656
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 656
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 656
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 656
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 651
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 634
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 540
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000162465 Hmgb3-ps-001 processed_pseudogene Mus_musculus 0 492

Loading