C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high mobility group box 3 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510526 HMGB3P3-001 ENSG00000250730 9606 + 5:6289857-6290624 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyENST00000510526
Transcript ID Breast Kidney
ENST00000510526 0.096±0.00 0.064±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 340
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 340
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 340
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 340
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 335
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 327
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000117931 Gm12365-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000162465 Hmgb3-ps-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 230
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000176139 Gm18367-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000117771 Gm5752-001 processed_pseudogene Mus_musculus 1.99993e-41 172

Loading