C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S15a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569365 RPS15A-011 ENSG00000134419 9606 - 16:18782968-18790334 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131374 Rps15a-001 protein_coding Mus_musculus 0 424
ENSMUST00000172457 Rps15a-201 protein_coding Mus_musculus 0 396
ENSMUST00000106588 Rps15a-004 protein_coding Mus_musculus 0 396
ENSMUST00000117476 Rps15a-ps6-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000087473 Rps15a-ps2-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000132586 Rps15a-ps5-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000121072 Rps15a-ps3-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000182051 Gm26983-001 processed_pseudogene Mus_musculus 0 340
ENSDART00000128613 rps15a-001 protein_coding Danio_rerio 0 302
ENSDART00000018822 rps15a-002 retained_intron Danio_rerio 3e-40 169

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