C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000576035 EIF4A1P9-001 ENSG00000262953 9606 - 17:2586330-2587866 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000576035
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000576035 0.046±0.00 0.013±0.00 0.012±0.00 0.011±0.00 0.055±0.00 0.037±0.00 0.032±0.00 0.023±0.00 0.010±0.00 0.070±0.05 0.067±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060V CIL_00060V_0002 CGP 17:2405562-2685615

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122226 Eif4a-ps4-001 processed_pseudogene Mus_musculus 0 1411
ENSMUST00000163666 Eif4a1-001 protein_coding Mus_musculus 0 1406
ENSMUST00000072982 Gm5513-201 processed_pseudogene Mus_musculus 0 1330
ENSMUST00000120460 Gm12136-001 processed_pseudogene Mus_musculus 0 1044
ENSMUST00000118589 Gm15568-001 processed_pseudogene Mus_musculus 0 918
ENSMUST00000128519 Eif4a1-012 retained_intron Mus_musculus 0 896
ENSMUST00000121086 Gm11258-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000123995 Eif4a1-002 retained_intron Mus_musculus 0 196

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