C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15568
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118589 Gm15568-001 ENSMUSG00000083257 10090 + 10:10343115-10344327 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118589
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118589 0.115±0.01 0.038±0.02 0.033±0.01 0.194±0.09 0.049±0.02 0.058±0.02 0.101±0.06 0.215±0.01 0.209±0.06 0.015±0.01 0.254±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J4 CIL_0004J4_0002 CGP 10:9755547-10472326
CIL_00050P CIL_00050P_0002 CGP 10:10335703-10558233

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293831 EIF4A1-001 protein_coding Homo_sapiens 0 1133
ENST00000396527 EIF4A1-003 retained_intron Homo_sapiens 4e-37 159
ENST00000411521 EIF4A1P3-001 processed_pseudogene Homo_sapiens 0 195
ENST00000415667 EIF4A1P13-001 processed_pseudogene Homo_sapiens 0 196
ENST00000421800 EIF4A1P7-001 processed_pseudogene Homo_sapiens 0 966
ENST00000422633 EIF4A1P2-001 processed_pseudogene Homo_sapiens 0 1077
ENST00000428062 EIF4A1P5-001 processed_pseudogene Homo_sapiens 0 771
ENST00000428832 EIF4A1P10-001 processed_pseudogene Homo_sapiens 0 1083
ENST00000448133 EIF4A1P6-001 processed_pseudogene Homo_sapiens 0 865
ENST00000451239 EIF4A1P11-001 processed_pseudogene Homo_sapiens 0 207
ENST00000550578 RP11-1136G11.6-001 processed_pseudogene Homo_sapiens 0 998
ENST00000551910 EIF4A1P12-001 processed_pseudogene Homo_sapiens 4e-38 159
ENST00000576035 EIF4A1P9-001 processed_pseudogene Homo_sapiens 0 918
ENST00000577269 EIF4A1-007 protein_coding Homo_sapiens 0 189
ENST00000578324 EIF4A1-009 retained_intron Homo_sapiens 0 265
ENST00000581544 EIF4A1-004 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000582050 EIF4A1-032 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000582746 EIF4A1-008 protein_coding Homo_sapiens 1.99965e-42 178
ENST00000583389 EIF4A1-031 protein_coding Homo_sapiens 0 189
ENST00000603184 RP11-175E9.2-001 processed_pseudogene Homo_sapiens 0 202
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 1133

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