C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580886 EIF4A1-012 ENSG00000161960 9606 + 17:7572826-7574782 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037A CIL_00037A_0002 CGP 17:7561875-7578715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129295 Eif4a1-005 retained_intron Mus_musculus 0 191
ENSMUST00000123995 Eif4a1-002 retained_intron Mus_musculus 0 191
ENSMUST00000122226 Eif4a-ps4-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSMUST00000145289 Eif4a1-004 retained_intron Mus_musculus 1.4013e-45 187
ENSMUST00000127677 Eif4a1-008 processed_transcript Mus_musculus 1.4013e-45 187
ENSMUST00000142214 Eif4a1-003 processed_transcript Mus_musculus 1.4013e-45 187
ENSMUST00000140310 Eif4a1-007 processed_transcript Mus_musculus 1.4013e-45 187
ENSMUST00000102589 Eif4a1-013 nonsense_mediated_decay Mus_musculus 1.4013e-45 187
ENSMUST00000128519 Eif4a1-012 retained_intron Mus_musculus 1.4013e-45 187
ENSMUST00000163666 Eif4a1-001 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000139299 Eif4a1-006 processed_transcript Mus_musculus 2.8026e-45 185
ENSMUST00000072982 Gm5513-201 processed_pseudogene Mus_musculus 9e-36 154
ENSDART00000140602 eif4a1b-002 processed_transcript Danio_rerio 3e-30 135
ENSDART00000011878 eif4a1b-001 protein_coding Danio_rerio 3e-30 135
ENSMUST00000121818 Gm12920-001 processed_pseudogene Mus_musculus 3e-25 119
ENSMUST00000120460 Gm12136-001 processed_pseudogene Mus_musculus 7e-22 108

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