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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000588843  |
RP11-49K24.5-001 |
ENSG00000267800 |
9606 | + |
18:47137018-47137290  |
processed_pseudogene |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008DZ | CIL_0008DZ_0001 | VISTA | 18:46943900-47544913 |
| CIL_0000B0 | CIL_0000B0_0002 | CGP | 18:47107403-47176281 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000117664
|
Gm10241-001 | processed_pseudogene | Mus_musculus | 0 | 348 |
|
ENSMUST00000117715
|
Gm11971-001 | processed_pseudogene | Mus_musculus | 0 | 348 |
|
ENSMUST00000153892
|
Sumo2-001 | protein_coding | Mus_musculus | 0 | 348 |
|
ENSMUST00000121569
|
Smt3h2-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 342 |
|
ENSMUST00000117589
|
Sumo2-004 | protein_coding | Mus_musculus | 0 | 339 |
|
ENSMUST00000118989
|
Gm13690-001 | processed_pseudogene | Mus_musculus | 0 | 337 |
|
ENSMUST00000021084
|
Sumo2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 333 |
|
ENSMUST00000119738
|
Gm12335-001 | processed_pseudogene | Mus_musculus | 0 | 331 |
|
ENSMUST00000121366
|
Gm13430-001 | processed_pseudogene | Mus_musculus | 0 | 331 |
|
ENSMUST00000121185
|
Sumo2-003 | protein_coding | Mus_musculus | 0 | 331 |
|
ENSMUST00000122297
|
Gm12755-001 | unprocessed_pseudogene | Mus_musculus | 0 | 305 |
|
ENSMUST00000121084
|
Smt3h2-ps-001 | processed_pseudogene | Mus_musculus | 0 | 300 |
|
ENSMUST00000140844
|
Sumo2-006 | retained_intron | Mus_musculus | 0 | 287 |
|
ENSMUST00000120751
|
Gm11556-001 | processed_pseudogene | Mus_musculus | 0 | 265 |
|
ENSMUST00000050672
|
Sumo2-005 | retained_intron | Mus_musculus | 0 | 207 |
|
ENSMUST00000117132
|
Gm9836-001 | processed_pseudogene | Mus_musculus | 0 | 206 |
|
ENSMUST00000118155
|
Sumo2-007 | protein_coding | Mus_musculus | 0 | 206 |
