C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 9836
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117132 Gm9836-001 ENSMUSG00000081071 10090 + 5:24256822-24257037 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaENSMUST00000117132
Transcript ID Bladder Brain Liver Ovary Placenta
ENSMUST00000117132 0.595±0.09 12.272±0.00 6.719±6.51 0.411±0.00 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 351
ENST00000326669 SUMO4-001 protein_coding Homo_sapiens 0 224
ENST00000404494 RP3-509I19.6-001 transcribed_processed_pseudogene Homo_sapiens 1e-31 139
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000415468 AC079809.2-001 processed_pseudogene Homo_sapiens 0 195
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 255
ENST00000427515 RP11-184I16.3-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 198
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 217
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000452006 SUMO2P10-001 processed_pseudogene Homo_sapiens 0 207
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000456482 SUMO2P2-001 processed_pseudogene Homo_sapiens 7e-19 97
ENST00000504193 SUMO2P4-002 processed_pseudogene Homo_sapiens 0 206
ENST00000504438 SUMO2P17-001 transcribed_processed_pseudogene Homo_sapiens 0 228
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 233
ENST00000506790 SUMO2P5-001 processed_pseudogene Homo_sapiens 3e-27 124
ENST00000511179 SUMO2P7-001 processed_pseudogene Homo_sapiens 0 195
ENST00000518873 SUMO2P18-001 processed_pseudogene Homo_sapiens 0.000001 57
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 195
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 261
ENST00000572284 RP3-509I19.6-002 processed_transcript Homo_sapiens 2e-31 139
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 235
ENST00000588843 RP11-49K24.5-001 processed_pseudogene Homo_sapiens 0 206

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