C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation factor Tu GTP binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589825 EFTUD2-010 ENSG00000108883 9606 - 17:44883556-44899445 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryENST00000589825
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000589825 12.509±0.00 18.722±0.00 21.226±0.00 9.707±0.00 8.594±0.00 13.691±0.00 18.896±0.00 6.872±0.00 50.675±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U4 CIL_0006U4_0001 CGP 17:44798448-44850480
CIL_0006U5 CIL_0006U5_0001 CGP 17:44846353-44899662
CIL_0006UA CIL_0006UA_0001 CGP 17:44849943-44905390

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021306 Eftud2-002 protein_coding Mus_musculus 0 619
ENSMUST00000107060 Eftud2-001 protein_coding Mus_musculus 0 601
ENSMUST00000123833 Eftud2-003 retained_intron Mus_musculus 0 599
ENSMUST00000173679 Eftud2-012 protein_coding Mus_musculus 0 588
ENSMUST00000147368 Eftud2-005 retained_intron Mus_musculus 0 484
ENSMUST00000138483 Eftud2-010 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000148209 Eftud2-004 retained_intron Mus_musculus 5.99756e-43 178

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