C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 3c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618094 TUBA3C-201 ENSG00000198033 9606 - 13:19173782-19181795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartOvaryTestisENST00000618094
Transcript ID Adrenal Breast Colon Heart Ovary Testis
ENST00000618094 0.412±0.00 0.118±0.00 0.089±0.00 0.279±0.00 0.021±0.00 25.069±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006457 TAS protein folding
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0044267 TAS cellular protein metabolic process
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088246 Tuba3a-201 protein_coding Mus_musculus 0 1583
ENSMUST00000087445 Tuba3b-001 protein_coding Mus_musculus 0 1574
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 0 1171
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 0 1160
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 1096
ENSDART00000077539 tuba1c-001 protein_coding Danio_rerio 0 1090
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 1057
ENSDART00000066177 tuba2-001 protein_coding Danio_rerio 0 850
ENSMUST00000188593 Tuba4a-003 protein_coding Mus_musculus 0 811
ENSDART00000115157 tuba4l-201 protein_coding Danio_rerio 0 725
ENSMUST00000186971 Tuba4a-008 protein_coding Mus_musculus 0 503
ENSDART00000113297 tuba1b-201 protein_coding Danio_rerio 0 305
ENSMUST00000121141 Gm3928-001 processed_pseudogene Mus_musculus 7.00005e-41 172
ENSMUST00000117552 Gm21998-001 processed_pseudogene Mus_musculus 2e-40 171
ENSDART00000016360 protein_coding Danio_rerio 0.0000001 62
ENSDART00000102713 protein_coding Danio_rerio 0.0000001 62
ENSDART00000102715 tuba8l3-001 protein_coding Danio_rerio 0.0000005 60

Loading