C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | protocadherin beta 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000623915  |
PCDHB5-002 |
ENSG00000113209 |
9606 | + |
5:141135229-141137449  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00062S | CIL_00062S_0004 | CGP | 5:141094578-141152636 |
| CIL_00062S | CIL_00062S_0005 | CGP | 5:141100473-141152636 |
| CIL_00062S | CIL_00062S_0003 | CGP | 5:141121799-141138625 |
| CIL_00062S | CIL_00062S_0006 | CGP | 5:141135218-141153287 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0007156 | IEA | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000056712
|
Pcdhb4-201 | protein_coding | Mus_musculus | 0 | 787 |
|
ENSMUST00000055949
|
Pcdhb18-201 | protein_coding | Mus_musculus | 0 | 784 |
|
ENSMUST00000052387
|
Pcdhb14-201 | protein_coding | Mus_musculus | 0 | 769 |
|
ENSMUST00000053073
|
Pcdhb11-201 | protein_coding | Mus_musculus | 0 | 758 |
|
ENSMUST00000051754
|
Pcdhb3-201 | protein_coding | Mus_musculus | 0 | 728 |
|
ENSMUST00000057228
|
Pcdhb9-201 | protein_coding | Mus_musculus | 0 | 691 |
|
ENSMUST00000056522
|
Pcdhb2-201 | protein_coding | Mus_musculus | 0 | 680 |
|
ENSMUST00000051126
|
Pcdhb10-201 | protein_coding | Mus_musculus | 0 | 676 |
