C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000EE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163793-ENSG00000138100 CGP 9606 2:27275421-27307439
GeneTranscriptPositionBiotype
ENSG00000115194 (SLC30A3)
solute carrier family 30 (zinc transporter), member 3 		ENST00000233535 (SLC30A3-001) 27254572-27263259 protein_coding
ENST00000424577 (SLC30A3-004) 27257906-27275341 protein_coding
ENST00000426569 (SLC30A3-006) 27258040-27275345 protein_coding
ENST00000426924 (SLC30A3-007) 27257202-27275817 protein_coding
ENST00000432351 (SLC30A3-005) 27256804-27264136 protein_coding
ENST00000445870 (SLC30A3-002) 27255386-27262871 protein_coding
ENST00000450118 (SLC30A3-003) 27258004-27262160 protein_coding
ENST00000482990 (SLC30A3-010) 27253847-27257820 retained_intron
ENST00000486309 (SLC30A3-008) 27257997-27259044 retained_intron
ENST00000497341 (SLC30A3-009) 27253684-27258583 retained_intron
ENSG00000138100 (TRIM54)
tripartite motif containing 54 		ENST00000296098 (TRIM54-001) 27282462-27307439 protein_coding
ENST00000380075 (TRIM54-002) 27282392-27307435 protein_coding
ENST00000485306 (TRIM54-004) 27305185-27306261 retained_intron
ENST00000488321 (TRIM54-003) 27304691-27305779 retained_intron
ENSG00000163793 (DNAJC5G)
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma 		ENST00000296097 (DNAJC5G-001) 27275421-27281430 protein_coding
ENST00000402462 (DNAJC5G-002) 27275463-27281430 protein_coding
ENST00000404433 (DNAJC5G-004) 27275475-27281430 protein_coding
ENST00000406962 (DNAJC5G-003) 27275475-27281499 protein_coding
ENST00000420191 (DNAJC5G-007) 27275433-27278261 protein_coding
ENST00000460358 (DNAJC5G-006) 27277932-27280717 retained_intron
ENSG00000163794 (UCN)
urocortin 		ENST00000296099 (UCN-001) 27307400-27308445 protein_coding
CIL_0000EE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053856-ENSMUSG00000062077 CGP 10090 5:31106285-31137630
GeneTranscriptPositionBiotype
ENSMUSG00000029151 (Slc30a3)
solute carrier family 30 (zinc transporter), member 3 		ENSMUST00000031037 (Slc30a3-001) 31086106-31093615 protein_coding
ENSMUST00000182290 (Slc30a3-006) 31087399-31088356 protein_coding
ENSMUST00000182364 (Slc30a3-005) 31088782-31093469 nonsense_mediated_decay
ENSMUST00000182444 (Slc30a3-002) 31086106-31108237 protein_coding
ENSMUST00000182672 (Slc30a3-004) 31089341-31094801 protein_coding
ENSMUST00000182776 (Slc30a3-003) 31089377-31108218 protein_coding
ENSMUSG00000053856 (Dnajc5g)
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma 		ENSMUST00000066544 (Dnajc5g-001) 31108319-31112526 protein_coding
ENSMUST00000186481 (Dnajc5g-003) 31108307-31111739 protein_coding
ENSMUST00000190241 (Dnajc5g-002) 31106285-31111984 nonsense_mediated_decay
ENSMUST00000191220 (Dnajc5g-004) 31108317-31111843 nonsense_mediated_decay
ENSMUSG00000062077 (Trim54)
tripartite motif-containing 54 		ENSMUST00000013771 (Trim54-001) 31116712-31137628 protein_coding
ENSMUST00000114637 (Trim54-002) 31116734-31137630 protein_coding
ENSMUSG00000085493 (Gm15469)
predicted gene 15469 		ENSMUST00000136014 (Gm15469-001) 31135753-31137344 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EE_0001ENSG00000115194ENST00000233535ENST00000424577ENST00000426569ENST00000426924ENST00000432351ENST00000445870ENST00000450118ENST00000482990ENST00000486309ENST00000497341ENSG00000138100ENST00000296098ENST00000380075ENST00000485306ENST00000488321ENSG00000163793ENST00000296097ENST00000402462ENST00000404433ENST00000406962ENST00000420191ENST00000460358ENSG00000163794ENST00000296099CIL_0000EE_0002ENSMUSG00000029151ENSMUST00000031037ENSMUST00000182290ENSMUST00000182364ENSMUST00000182444ENSMUST00000182672ENSMUST00000182776ENSMUSG00000053856ENSMUST00000066544ENSMUST00000186481ENSMUST00000190241ENSMUST00000191220ENSMUSG00000062077ENSMUST00000013771ENSMUST00000114637ENSMUSG00000085493ENSMUST00000136014
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EE_0001ENSG00000115194ENST00000233535ENST00000424577ENST00000432351ENST00000482990ENST00000497341ENSG00000138100ENST00000296098ENST00000380075ENST00000485306ENST00000488321ENSG00000163793ENST00000296097ENST00000402462ENST00000404433ENST00000406962ENST00000420191ENST00000460358ENSG00000163794ENST00000296099CIL_0000EE_0002ENSMUSG00000029151ENSMUST00000031037ENSMUST00000182290ENSMUST00000182444ENSMUST00000182672ENSMUST00000182776ENSMUSG00000053856ENSMUST00000066544ENSMUST00000186481ENSMUST00000190241ENSMUST00000191220ENSMUSG00000062077ENSMUST00000013771ENSMUST00000114637ENSMUSG00000085493ENSMUST00000136014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115194 ENST00000233535 N/A 0.636±0.00 N/A 7.154±0.00 N/A N/A 1.011±0.89 N/A N/A N/A N/A 0.085±0.00 0.036±0.00 26.270±0.00
ENST00000424577 N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000426569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432351 0.095±0.00 N/A N/A 2.699±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.02 N/A N/A
ENST00000486309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497341 N/A N/A N/A 1.011±0.00 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138100 ENST00000296098 0.070±0.00 0.243±0.00 N/A 0.486±0.00 1.464±0.00 0.128±0.00 N/A 0.293±0.00 N/A N/A N/A 0.041±0.00 0.031±0.00 2.284±0.00
ENST00000380075 N/A N/A N/A 0.207±0.00 3.084±2.55 N/A 42.864±30.03 1.027±0.00 N/A 0.275±0.00 85.273±49.30 0.148±0.00 0.249±0.20 7.322±0.15
ENST00000485306 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000488321 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A 0.099±0.00 N/A
ENSG00000163793 ENST00000296097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.339±0.81
ENST00000402462 N/A 0.212±0.00 N/A N/A 0.075±0.00 0.048±0.00 0.217±0.00 0.083±0.00 0.007±0.00 N/A N/A N/A N/A 11.308±0.00
ENST00000404433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 11.945±0.00
ENST00000406962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A
ENST00000420191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A
ENST00000460358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.202±0.00
ENSG00000163794 ENST00000296099 0.100±0.00 0.424±0.00 0.131±0.00 1.381±0.89 N/A 1.062±0.00 N/A 0.850±0.00 1.137±0.00 1.128±0.00 N/A 0.923±0.18 0.866±0.32 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029151 ENSMUST00000031037 N/A N/A N/A 9.076±4.32 N/A N/A 0.013±0.00 0.076±0.01 0.179±0.11 N/A 0.041±0.00 1.541±0.41 0.250±0.13 N/A
ENSMUST00000182290 N/A N/A N/A 19.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182444 0.031±0.00 0.018±0.00 0.010±0.01 N/A 0.082±0.04 0.047±0.02 0.058±0.03 0.060±0.03 0.145±0.06 0.033±0.02 N/A N/A N/A 51.399±27.39
ENSMUST00000182672 N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A 0.112±0.00 N/A N/A N/A
ENSMUST00000182776 N/A N/A N/A N/A N/A N/A N/A 0.082±0.02 N/A N/A N/A N/A 0.225±0.00 N/A
ENSMUSG00000053856 ENSMUST00000066544 N/A N/A N/A 0.025±0.00 0.033±0.01 N/A 0.025±0.00 N/A N/A N/A N/A 0.120±0.08 0.045±0.02 72.974±29.96
ENSMUST00000186481 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A N/A 0.086±0.00 N/A
ENSMUST00000190241 N/A N/A N/A N/A N/A N/A 0.047±0.00 0.050±0.00 N/A N/A N/A N/A 0.210±0.04 N/A
ENSMUST00000191220 N/A N/A N/A N/A N/A N/A 0.030±0.00 0.073±0.00 N/A N/A N/A 0.128±0.00 0.158±0.14 19.054±0.00
ENSMUSG00000062077 ENSMUST00000013771 N/A N/A N/A N/A 21.662±8.95 N/A 74.584±15.93 1.285±0.30 0.126±0.11 3.356±2.18 158.283±21.93 N/A 0.022±0.00 3.308±0.78
ENSMUST00000114637 N/A N/A N/A 0.145±0.17 5.736±0.00 N/A N/A 0.073±0.00 0.012±0.00 0.936±0.00 N/A N/A 0.027±0.00 N/A
ENSMUSG00000085493 ENSMUST00000136014 N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.250±0.00 0.016±0.00 0.254±0.00 N/A N/A 0.016±0.01 3.164±0.80

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