C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4335
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182581 Gm4335-001 ENSMUSG00000097989 10090 + 15:93196595-93197598 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000182581
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000182581 0.271±0.24 0.256±0.15 0.811±0.63 0.180±0.17 0.365±0.32 0.138±0.05 0.427±0.27 0.362±0.22 0.222±0.23 0.452±0.08 0.175±0.07 0.149±0.07 0.053±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DL CIL_0003DL_0003 CGP 15:92396915-93275161

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1240
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 968
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1214
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1240
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1240
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 556
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 998
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 928
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1048
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 902
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 315
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 638
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 905
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1112
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 935
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 891
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 614
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 739
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 845
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 691
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 695
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 680
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 592
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1164
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 861
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 617
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 968
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 968
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 638
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 869
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 922
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 928
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 1003
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 678
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 294
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 294
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 926
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 953
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 1003
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 883
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 778
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 778
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 610
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1094

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