C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) polymerase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554887 PAPOLA-010 ENSG00000090060 9606 + 14:96501433-96527496 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000554887
Transcript ID Ovary Placenta Testis
ENST00000554887 31.502±0.00 45.019±0.00 86.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HI CIL_0003HI_0001 CGP 14:96392111-96567111
CIL_0003HJ CIL_0003HJ_0001 CGP 14:96501433-96931722

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172040 Papola-012 processed_transcript Mus_musculus 0 575
ENSMUST00000170002 Papola-010 protein_coding Mus_musculus 0 571
ENSMUST00000166735 Papola-007 protein_coding Mus_musculus 0 571
ENSMUST00000169938 Papola-004 nonsense_mediated_decay Mus_musculus 0 571
ENSMUST00000166498 Papola-005 retained_intron Mus_musculus 0 571
ENSMUST00000163473 Papola-009 protein_coding Mus_musculus 0 571
ENSMUST00000021535 Papola-003 nonsense_mediated_decay Mus_musculus 0 571
ENSMUST00000168186 Papola-002 protein_coding Mus_musculus 0 571
ENSMUST00000109901 Papola-001 protein_coding Mus_musculus 0 571
ENSMUST00000163805 Papola-006 retained_intron Mus_musculus 0 525
ENSMUST00000166329 Papola-008 nonsense_mediated_decay Mus_musculus 0 449
ENSMUST00000099400 Papolb-001 protein_coding Mus_musculus 0 337
ENSMUST00000164326 Papola-014 nonsense_mediated_decay Mus_musculus 0 241
ENSMUST00000170540 Papola-015 protein_coding Mus_musculus 0 237
ENSMUST00000165584 Papola-013 processed_transcript Mus_musculus 0 237

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