C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubulin, beta 2A class IIa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489942 TUBB2A-002 ENSG00000137267 9606 - 6:3154579-3157526 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverENST00000489942
Transcript ID Bladder Breast Colon Liver
ENST00000489942 0.278±0.00 0.390±0.00 0.543±0.00 2.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IT CIL_0003IT_0001 CGP 6:3118374-3157526
CIL_0003IU CIL_0003IU_0001 CGP 6:3153669-3231730

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 457
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 440
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 364
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 339
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 339
ENSDART00000127071 FP102463.1-201 protein_coding Danio_rerio 0 326
ENSDART00000024135 protein_coding Danio_rerio 0 320
ENSDART00000129104 protein_coding Danio_rerio 0 320
ENSDART00000055380 tubb5-201 protein_coding Danio_rerio 0 305
ENSMUST00000134978 Tubb5-003 protein_coding Mus_musculus 1e-20 104

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