C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta 2B class IIb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473006 TUBB2B-002 ENSG00000137285 9606 - 6:3224283-3231730 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000473006
Transcript ID Heart
ENST00000473006 0.391±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IU CIL_0003IU_0001 CGP 6:3153669-3231730
CIL_0003IV CIL_0003IV_0001 CGP 6:3224261-3303373

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 1997
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1724
ENSDART00000041279 tubb4b-001 protein_coding Danio_rerio 0 1314
ENSMUST00000043584 Tubb4b-001 protein_coding Mus_musculus 0 1312
ENSMUST00000071135 Tubb4a-201 protein_coding Mus_musculus 0 1280
ENSDART00000143702 zgc:123194-001 protein_coding Danio_rerio 0 1273
ENSMUST00000179460 Tubb4b-ps1-201 protein_coding Mus_musculus 0 1258
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 1251
ENSDART00000055380 tubb5-201 protein_coding Danio_rerio 0 1247
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 1243
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 1240
ENSDART00000066859 tubb4b-001 protein_coding Danio_rerio 0 1212
ENSDART00000019573 zgc:65894-001 protein_coding Danio_rerio 0 1208
ENSDART00000131187 tubb4b-201 protein_coding Danio_rerio 0 1206
ENSDART00000061149 zgc:55461-001 protein_coding Danio_rerio 0 1168
ENSDART00000024135 protein_coding Danio_rerio 0 1158
ENSDART00000129104 protein_coding Danio_rerio 0 1158
ENSMUST00000187481 RP23-8J15.8-001 processed_pseudogene Mus_musculus 0 1125
ENSDART00000127071 FP102463.1-201 protein_coding Danio_rerio 0 1035
ENSDART00000147110 tubb4b-002 processed_transcript Danio_rerio 0 702
ENSDART00000134744 tubb4b-003 processed_transcript Danio_rerio 0 649
ENSMUST00000160140 Gm16165-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 586

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