C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007B9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000007952-ENSG00000182489 CGP 9606 X:100843324-100929433
GeneTranscriptPositionBiotype
ENSG00000007952 (NOX1)
NADPH oxidase 1 		ENST00000217885 (NOX1-003) 100843836-100874209 protein_coding
ENST00000372960 (NOX1-201) 100843324-100874345 protein_coding
ENST00000372964 (NOX1-002) 100843333-100874209 protein_coding
ENST00000372966 (NOX1-001) 100843324-100874345 protein_coding
ENST00000427768 (NOX1-004) 100843783-100850336 protein_coding
ENSG00000179031 (LL0XNC01-131B10.2)
 ENST00000447373 (LL0XNC01-131B10.2-001) 100910712-100911489 processed_pseudogene
ENSG00000182489 (XKRX)
XK, Kell blood group complex subunit-related, X-linked 		ENST00000372956 (XKRX-001) 100913445-100928909 protein_coding
ENST00000468904 (XKRX-002) 100914299-100929433 protein_coding
ENSG00000233680 (HNRNPA1P27)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 27 		ENST00000412087 (HNRNPA1P27-001) 100887636-100888590 processed_pseudogene
ENSG00000239345 (HNRNPA1P26)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 26 		ENST00000457695 (HNRNPA1P26-001) 100855288-100856379 processed_pseudogene
ENSG00000275220 (Z83819.1)
 ENST00000616672 (Z83819.1-201) 100890396-100890487 miRNA
CIL_0007B9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031257-ENSMUSG00000031257 CGP 10090 X:134086421-134221956
GeneTranscriptPositionBiotype
ENSMUSG00000031256 (Cstf2)
cleavage stimulation factor, 3' pre-RNA subunit 2 		ENSMUST00000033609 (Cstf2-001) 134059197-134086819 protein_coding
ENSMUST00000113286 (Cstf2-007) 134059215-134075863 protein_coding
ENSMUST00000113287 (Cstf2-002) 134059187-134086046 protein_coding
ENSMUST00000136510 (Cstf2-006) 134066261-134074310 protein_coding
ENSMUST00000144483 (Cstf2-005) 134059334-134062633 protein_coding
ENSMUST00000148080 (Cstf2-008) 134059311-134061496 processed_transcript
ENSMUST00000149658 (Cstf2-003) 134059334-134086819 retained_intron
ENSMUST00000156778 (Cstf2-004) 134062397-134074273 protein_coding
ENSMUSG00000031257 (Nox1)
NADPH oxidase 1 		ENSMUST00000033610 (Nox1-001) 134086421-134111854 protein_coding
ENSMUST00000113275 (Nox1-002) 134087054-134111765 protein_coding
ENSMUST00000159231 (Nox1-004) 134107733-134137711 protein_coding
ENSMUST00000159259 (Nox1-005) 134087146-134111708 protein_coding
ENSMUST00000162833 (Nox1-003) 134107733-134221956 protein_coding
ENSMUSG00000031258 (Xkrx)
X Kell blood group precursor related X linked 		ENSMUST00000033611 (Xkrx-001) 134149043-134161928 protein_coding
ENSMUST00000148722 (Xkrx-002) 134151110-134162076 processed_transcript
ENSMUSG00000052549 (Arl13a)
ADP-ribosylation factor-like 13A 		ENSMUST00000064476 (Arl13a-001) 134187501-134208028 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007B9_0001ENSG00000007952ENST00000217885ENST00000372960ENST00000372964ENST00000372966ENST00000427768ENSG00000179031ENST00000447373ENSG00000182489ENST00000372956ENST00000468904ENSG00000233680ENST00000412087ENSG00000239345ENST00000457695ENSG00000275220ENST00000616672CIL_0007B9_0002ENSMUSG00000031256ENSMUST00000033609ENSMUST00000113286ENSMUST00000113287ENSMUST00000136510ENSMUST00000144483ENSMUST00000148080ENSMUST00000149658ENSMUST00000156778ENSMUSG00000031257ENSMUST00000033610ENSMUST00000113275ENSMUST00000159231ENSMUST00000159259ENSMUST00000162833ENSMUSG00000031258ENSMUST00000033611ENSMUST00000148722ENSMUSG00000052549ENSMUST00000064476
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007B9_0001ENSG00000007952ENST00000217885ENST00000372960ENST00000372964ENST00000372966ENST00000427768ENSG00000179031ENST00000447373ENSG00000182489ENST00000372956ENST00000468904ENSG00000233680ENST00000412087ENSG00000239345ENST00000457695ENSG00000275220ENST00000616672CIL_0007B9_0002ENSMUSG00000031256ENSMUST00000033609ENSMUST00000113286ENSMUST00000113287ENSMUST00000136510ENSMUST00000144483ENSMUST00000148080ENSMUST00000149658ENSMUST00000156778ENSMUSG00000031257ENSMUST00000033610ENSMUSG00000031258ENSMUST00000033611ENSMUST00000148722ENSMUSG00000052549ENSMUST00000064476
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007952 ENST00000217885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.754±0.00 0.031±0.00 N/A
ENST00000372960 0.015±0.00 N/A N/A 0.028±0.00 0.604±0.00 1.962±0.00 N/A N/A N/A N/A N/A 0.991±0.00 N/A 0.009±0.00
ENST00000372964 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A 0.075±0.00 N/A
ENST00000372966 N/A N/A N/A N/A N/A 3.245±2.53 N/A N/A N/A N/A N/A 2.610±1.31 N/A 0.009±0.00
ENST00000427768 N/A N/A N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A N/A N/A N/A N/A
ENSG00000179031 ENST00000447373 N/A 0.104±0.00 0.038±0.00 N/A 0.014±0.00 0.029±0.00 N/A N/A N/A 0.151±0.00 N/A 0.039±0.02 0.016±0.00 0.026±0.00
ENSG00000182489 ENST00000372956 0.034±0.00 0.198±0.00 N/A 0.024±0.01 N/A 0.067±0.00 N/A 0.025±0.00 0.159±0.14 0.772±0.00 N/A 0.270±0.21 0.155±0.03 0.154±0.00
ENST00000468904 N/A N/A 0.071±0.00 0.012±0.00 0.242±0.00 0.007±0.00 0.021±0.00 0.257±0.00 N/A 0.127±0.00 0.033±0.00 0.312±0.00 N/A 0.175±0.00
ENSG00000233680 ENST00000412087 0.187±0.00 0.379±0.00 N/A 0.218±0.00 0.091±0.00 0.139±0.00 0.055±0.00 0.183±0.00 N/A 0.265±0.10 0.094±0.00 0.120±0.09 0.075±0.03 0.123±0.00
ENSG00000239345 ENST00000457695 0.013±0.00 0.068±0.00 N/A 0.057±0.00 N/A 0.326±0.16 0.050±0.00 N/A N/A N/A 0.048±0.00 0.128±0.13 N/A N/A
ENSG00000275220 ENST00000616672 N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031256 ENSMUST00000033609 4.806±0.98 4.025±0.58 4.528±0.15 5.575±1.62 4.389±1.17 6.520±0.86 1.582±0.14 4.404±0.73 4.561±2.38 5.628±0.25 0.744±0.19 9.353±3.80 4.374±2.23 6.919±2.56
ENSMUST00000113286 1.968±0.35 2.301±0.04 N/A N/A 1.776±0.40 2.546±0.41 0.727±0.11 N/A 1.719±1.03 N/A 0.523±0.05 3.846±0.79 N/A 7.450±3.17
ENSMUST00000113287 1.560±0.35 2.796±0.29 1.252±0.00 10.666±0.00 1.295±0.28 2.652±0.00 0.820±0.26 1.090±0.17 1.581±0.78 N/A 0.560±0.11 3.584±1.21 4.321±2.01 1.782±0.00
ENSMUST00000136510 N/A N/A N/A 58.456±0.00 N/A N/A N/A N/A N/A N/A N/A 37.812±0.00 44.799±26.97 27.599±0.00
ENSMUST00000144483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.537±0.00
ENSMUST00000148080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.188±0.00
ENSMUST00000149658 N/A 1.139±0.09 N/A 1.925±0.55 0.594±0.00 N/A 0.228±0.01 N/A 0.379±0.07 N/A 0.197±0.01 1.172±0.33 0.320±0.00 N/A
ENSMUST00000156778 N/A 5.937±0.00 N/A 34.579±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031257 ENSMUST00000033610 N/A N/A N/A N/A N/A 5.257±1.36 N/A N/A N/A N/A 0.550±0.00 N/A N/A N/A
ENSMUST00000113275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031258 ENSMUST00000033611 0.257±0.08 0.546±0.07 1.564±0.17 0.269±0.15 2.108±0.96 0.225±0.13 0.455±0.06 0.346±0.07 0.072±0.03 0.749±0.22 0.340±0.08 0.315±0.12 0.305±0.11 0.094±0.03
ENSMUST00000148722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.02
ENSMUSG00000052549 ENSMUST00000064476 N/A N/A 0.008±0.00 0.027±0.03 0.059±0.03 N/A 0.018±0.00 0.046±0.02 0.030±0.03 N/A 0.017±0.00 N/A 0.011±0.01 7.602±0.48

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