C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123229 Rps6-004 ENSMUSG00000028495 10090 - 4:86855752-86857354 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000123229
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000123229 50.248±3.15 111.993±3.92 105.123±39.53 156.072±11.59 242.583±55.88 50.595±21.38 106.320±4.09 110.505±16.81 161.072±0.00 166.148±55.06 50.026±0.00 50.934±9.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DD CIL_0007DD_0002 CGP 4:86748555-86857412
CIL_0007DC CIL_0007DC_0002 CGP 4:86854660-86934822

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315377 RPS6-003 protein_coding Homo_sapiens 0 568
ENST00000380381 RPS6-004 protein_coding Homo_sapiens 7e-39 165
ENST00000380384 RPS6-002 protein_coding Homo_sapiens 0 568
ENST00000380394 RPS6-001 protein_coding Homo_sapiens 0 593
ENST00000397390 RP11-146N23.1-001 processed_pseudogene Homo_sapiens 0 416
ENST00000463969 RP11-864G5.1-001 processed_pseudogene Homo_sapiens 0 388
ENST00000475592 RP11-392P7.1-001 processed_pseudogene Homo_sapiens 0 438

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