C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007UF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1513 VISTA 9606 5:14144246-14745917
GeneTranscriptPositionBiotype
ENSG00000038382 (TRIO)
trio Rho guanine nucleotide exchange factor 		ENST00000344135 (TRIO-009) 14488448-14510203 protein_coding
ENST00000344204 (TRIO-001) 14143702-14510204 protein_coding
ENST00000502490 (TRIO-019) 14388613-14397341 retained_intron
ENST00000502816 (TRIO-012) 14143702-14290887 retained_intron
ENST00000503399 (TRIO-016) 14492370-14496986 retained_intron
ENST00000504606 (TRIO-013) 14290977-14297513 retained_intron
ENST00000505971 (TRIO-011) 14143702-14287104 retained_intron
ENST00000506611 (TRIO-005) 14474012-14477333 retained_intron
ENST00000507714 (TRIO-014) 14419814-14420800 processed_transcript
ENST00000508283 (TRIO-021) 14498516-14504674 retained_intron
ENST00000508343 (TRIO-017) 14498139-14499181 retained_intron
ENST00000508717 (TRIO-022) 14498516-14508333 retained_intron
ENST00000509354 (TRIO-020) 14399024-14420186 retained_intron
ENST00000509967 (TRIO-008) 14183798-14399400 protein_coding
ENST00000510281 (TRIO-007) 14482417-14487789 retained_intron
ENST00000510757 (TRIO-023) 14387343-14387950 retained_intron
ENST00000511019 (TRIO-006) 14479321-14481796 retained_intron
ENST00000512070 (TRIO-010) 14143837-14508676 nonsense_mediated_decay
ENST00000512303 (TRIO-018) 14406214-14419904 retained_intron
ENST00000512979 (TRIO-015) 14418783-14420021 processed_transcript
ENST00000513206 (TRIO-002) 14290977-14532128 protein_coding
ENST00000515144 (TRIO-003) 14293041-14489165 retained_intron
ENST00000515710 (TRIO-004) 14440819-14466451 processed_transcript
ENST00000620511 (TRIO-201) 14465589-14510201 protein_coding
ENSG00000145569 (FAM105A)
family with sequence similarity 105, member A 		ENST00000274217 (FAM105A-001) 14581775-14612720 protein_coding
ENST00000506258 (FAM105A-002) 14610338-14615007 processed_transcript
ENST00000513825 (FAM105A-003) 14600965-14607370 processed_transcript
ENSG00000154122 (ANKH)
ANKH inorganic pyrophosphate transport regulator 		ENST00000284268 (ANKH-001) 14704804-14871778 protein_coding
ENST00000502585 (ANKH-005) 14711088-14717088 retained_intron
ENST00000503389 (ANKH-004) 14769007-14788217 processed_transcript
ENST00000503939 (ANKH-007) 14741292-14755888 processed_transcript
ENST00000505140 (ANKH-002) 14868709-14871726 nonsense_mediated_decay
ENST00000513115 (ANKH-003) 14768616-14871472 retained_intron
ENST00000515517 (ANKH-006) 14741457-14749227 retained_intron
ENSG00000154124 (OTULIN)
OTU deubiquitinase with linear linkage specificity 		ENST00000284274 (OTULIN-001) 14664748-14699711 protein_coding
ENST00000503023 (OTULIN-003) 14664664-14690270 nonsense_mediated_decay
ENST00000506417 (OTULIN-005) 14681550-14693400 protein_coding
ENST00000507335 (OTULIN-002) 14664732-14674137 retained_intron
ENST00000508678 (OTULIN-006) 14681576-14687940 retained_intron
ENST00000514913 (OTULIN-004) 14678756-14690151 nonsense_mediated_decay
ENSG00000248791 (CTD-2165H16.3)
 ENST00000503819 (CTD-2165H16.3-001) 14620020-14621313 processed_pseudogene
ENSG00000250182 (EEF1A1P13)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 13 		ENST00000503537 (EEF1A1P13-001) 14651941-14653329 processed_pseudogene
ENSG00000250526 (CCT6P2)
chaperonin containing TCP1, subunit 6 (zeta) pseudogene 2 		ENST00000507234 (CCT6P2-001) 14639426-14641018 processed_pseudogene
ENSG00000261360 (CTD-2165H16.4)
 ENST00000563101 (CTD-2165H16.4-001) 14661808-14664604 antisense
ENST00000564167 (CTD-2165H16.4-003) 14663103-14664275 antisense
ENST00000567048 (CTD-2165H16.4-002) 14663101-14664573 antisense
CIL_0007UF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1513 VISTA 10090 15:27483860-28085186
GeneTranscriptPositionBiotype
ENSMUSG00000022263 (Trio)
triple functional domain (PTPRF interacting) 		ENSMUST00000090247 (Trio-201) 27730652-28025848 protein_coding
ENSMUSG00000022265 (Ank)
progressive ankylosis 		ENSMUST00000022875 (Ank-001) 27466677-27594909 protein_coding
ENSMUST00000134004 (Ank-002) 27571449-27593163 retained_intron
ENSMUSG00000046034 (Otulin)
OTU deubiquitinase with linear linkage specificity 		ENSMUST00000059662 (Otulin-201) 27605919-27630693 protein_coding
ENSMUSG00000056069 (Fam105a)
family with sequence similarity 105, member A 		ENSMUST00000100739 (Fam105a-201) 27655071-27681542 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UF_0001ENSG00000038382ENST00000344135ENST00000344204ENST00000502490ENST00000502816ENST00000503399ENST00000504606ENST00000505971ENST00000506611ENST00000507714ENST00000508283ENST00000508343ENST00000508717ENST00000509354ENST00000509967ENST00000510281ENST00000510757ENST00000511019ENST00000512070ENST00000512303ENST00000512979ENST00000513206ENST00000515144ENST00000515710ENST00000620511ENSG00000145569ENST00000274217ENST00000506258ENST00000513825ENSG00000154122ENST00000284268ENST00000502585ENST00000503389ENST00000503939ENST00000505140ENST00000513115ENST00000515517ENSG00000154124ENST00000284274ENST00000503023ENST00000506417ENST00000507335ENST00000508678ENST00000514913ENSG00000248791ENST00000503819ENSG00000250182ENST00000503537ENSG00000250526ENST00000507234ENSG00000261360ENST00000563101ENST00000564167ENST00000567048CIL_0007UF_0002ENSMUSG00000022263ENSMUST00000090247ENSMUSG00000022265ENSMUST00000022875ENSMUST00000134004ENSMUSG00000046034ENSMUST00000059662ENSMUSG00000056069ENSMUST00000100739
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UF_0001ENSG00000038382ENST00000344135ENST00000344204ENST00000509967ENST00000512070ENST00000513206ENST00000515144ENST00000620511ENSG00000145569ENST00000274217ENSG00000154122ENST00000284268ENST00000502585ENST00000503939ENSG00000154124ENST00000284274ENST00000503023ENST00000514913ENSG00000248791ENST00000503819ENSG00000250182ENST00000503537ENSG00000250526ENST00000507234ENSG00000261360ENST00000563101ENST00000564167ENST00000567048CIL_0007UF_0002ENSMUSG00000022263ENSMUST00000090247ENSMUSG00000022265ENSMUST00000022875ENSMUSG00000046034ENSMUST00000059662ENSMUSG00000056069ENSMUST00000100739
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000038382 ENST00000344135 N/A N/A N/A 4.779±0.00 3.570±0.00 N/A N/A N/A 0.939±0.00 1.598±0.00 N/A 4.091±0.00 N/A 4.754±0.00
ENST00000344204 2.251±0.00 2.662±0.00 N/A 1.424±0.00 2.618±0.63 1.613±0.00 3.574±0.00 1.108±0.00 1.282±0.02 2.769±1.08 0.376±0.00 2.743±1.06 2.519±1.84 N/A
ENST00000502490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509967 N/A N/A 0.911±0.00 N/A N/A N/A N/A N/A 1.952±0.00 7.393±0.00 N/A 3.825±0.00 N/A N/A
ENST00000510281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512070 3.610±0.00 1.925±0.00 1.162±0.00 4.338±0.79 3.114±1.50 3.563±0.17 1.091±0.03 1.094±0.66 1.993±0.00 2.847±0.00 1.547±0.28 4.882±0.62 2.203±0.09 2.233±1.22
ENST00000512303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.101±0.00
ENST00000515144 N/A N/A N/A 3.655±0.00 N/A N/A 0.991±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000515710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620511 N/A N/A N/A N/A N/A N/A N/A 2.565±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000145569 ENST00000274217 1.068±0.00 1.341±0.00 1.139±0.00 1.323±0.49 3.464±2.57 3.582±1.85 0.333±0.17 1.247±0.77 1.290±1.02 6.176±4.77 0.033±0.00 4.029±3.45 3.039±1.20 2.738±0.15
ENST00000506258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154122 ENST00000284268 4.148±0.00 3.799±0.00 0.385±0.00 8.715±4.30 3.537±0.78 2.957±0.53 5.770±4.22 2.497±0.20 2.225±1.34 2.042±1.41 2.180±0.26 4.108±1.51 3.094±1.30 1.979±1.60
ENST00000502585 N/A N/A N/A N/A N/A N/A N/A N/A 14.936±0.00 11.557±0.00 9.231±2.56 16.924±1.89 11.574±7.22 1.744±0.00
ENST00000503389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503939 23.026±0.00 N/A 4.838±0.00 N/A 24.354±0.00 N/A N/A 13.538±0.00 N/A 16.964±0.00 N/A N/A 8.165±0.00 16.792±0.00
ENST00000505140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154124 ENST00000284274 1.632±0.00 0.622±0.00 1.757±0.00 1.080±0.09 1.106±0.64 1.127±0.62 1.449±0.14 2.246±0.20 1.941±0.12 3.036±0.70 0.986±0.42 3.208±1.65 2.142±0.64 2.428±0.33
ENST00000503023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.987±0.00 N/A N/A N/A
ENST00000506417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.209±0.00 15.771±0.00
ENSG00000248791 ENST00000503819 0.022±0.00 0.180±0.00 N/A 0.133±0.04 0.058±0.00 0.470±0.33 0.093±0.08 0.013±0.00 0.259±0.00 0.591±0.56 N/A 0.174±0.08 0.026±0.01 0.049±0.02
ENSG00000250182 ENST00000503537 1.897±0.00 1.454±0.00 0.204±0.00 0.472±0.16 0.985±0.53 0.870±0.63 0.076±0.06 0.624±0.26 0.380±0.07 0.829±0.30 0.396±0.00 0.546±0.15 0.499±0.09 0.657±0.32
ENSG00000250526 ENST00000507234 N/A 0.021±0.00 N/A 0.007±0.00 0.053±0.05 N/A N/A 0.007±0.00 N/A N/A 0.012±0.00 N/A N/A 0.031±0.00
ENSG00000261360 ENST00000563101 N/A N/A 0.096±0.00 0.071±0.05 0.027±0.00 0.033±0.00 0.014±0.00 0.051±0.03 N/A 0.163±0.00 N/A 0.129±0.06 0.028±0.01 0.145±0.06
ENST00000564167 0.081±0.00 N/A N/A 0.442±0.00 N/A 0.287±0.00 0.016±0.00 0.187±0.00 N/A N/A 0.230±0.00 0.178±0.00 0.086±0.06 0.259±0.00
ENST00000567048 N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A 0.244±0.00 0.326±0.07 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022263 ENSMUST00000090247 7.807±2.66 5.777±1.14 3.609±2.70 20.353±1.92 5.847±2.21 6.774±1.85 4.042±0.53 6.081±1.94 1.110±0.44 5.139±1.98 3.012±0.64 7.092±3.18 5.663±2.07 1.413±0.62
ENSMUSG00000022265 ENSMUST00000022875 27.843±0.94 18.823±2.66 16.817±4.99 12.388±6.41 33.077±6.08 34.593±3.21 67.377±4.83 8.885±0.39 12.340±4.02 10.485±1.99 54.362±3.87 21.750±8.63 14.041±5.86 3.430±1.54
ENSMUST00000134004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046034 ENSMUST00000059662 9.158±0.77 24.189±8.64 9.492±2.40 9.528±2.34 15.897±1.05 21.421±4.69 7.710±0.84 16.262±4.28 19.627±10.40 11.882±1.16 7.177±1.26 24.781±6.28 18.956±6.52 6.126±0.93
ENSMUSG00000056069 ENSMUST00000100739 2.082±1.47 2.357±0.36 0.550±0.12 0.193±0.02 4.901±2.75 2.405±1.00 0.267±0.03 1.130±0.32 0.463±0.17 4.039±2.50 0.097±0.04 2.055±1.07 1.937±2.56 0.537±0.09

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