C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503537 EEF1A1P13-001 ENSG00000250182 9606 - 5:14651941-14653329 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000503537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000503537 1.897±0.00 1.454±0.00 0.204±0.00 0.472±0.16 0.985±0.53 0.870±0.63 0.076±0.06 0.624±0.26 0.380±0.07 0.829±0.30 0.396±0.00 0.546±0.15 0.499±0.09 0.657±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UF CIL_0007UF_0001 VISTA 5:14144246-14745917

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1834
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1694
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1688
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1602
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1507
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1489
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1447
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 1098
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 1066
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 1029
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 869
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 760
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 702
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 568
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 560
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 459

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