C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008ED_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1635 VISTA 9606 2:219606364-220208558
GeneTranscriptPositionBiotype
ENSG00000114923 (SLC4A3)
solute carrier family 4 (anion exchanger), member 3 		ENST00000273063 (SLC4A3-001) 219627565-219641980 protein_coding
ENST00000317151 (SLC4A3-002) 219627661-219641980 protein_coding
ENST00000358055 (SLC4A3-009) 219627327-219641971 protein_coding
ENST00000373760 (SLC4A3-010) 219627394-219641971 protein_coding
ENST00000413743 (SLC4A3-008) 219631130-219633009 protein_coding
ENST00000416910 (SLC4A3-011) 219632059-219637795 nonsense_mediated_decay
ENST00000425141 (SLC4A3-004) 219627627-219641728 nonsense_mediated_decay
ENST00000444906 (SLC4A3-005) 219633346-219635781 nonsense_mediated_decay
ENST00000497589 (SLC4A3-003) 219628516-219632418 processed_transcript
ENSG00000144589 (STK11IP)
serine/threonine kinase 11 interacting protein 		ENST00000295641 (STK11IP-201) 219597874-219616451 protein_coding
ENST00000413891 (STK11IP-009) 219612043-219615202 nonsense_mediated_decay
ENST00000447191 (STK11IP-011) 219613916-219615995 protein_coding
ENST00000456857 (STK11IP-004) 219598094-219602083 nonsense_mediated_decay
ENST00000456909 (STK11IP-001) 219597860-219616451 protein_coding
ENST00000459692 (STK11IP-003) 219598443-219606058 processed_transcript
ENST00000465230 (STK11IP-005) 219605507-219606633 retained_intron
ENST00000466648 (STK11IP-006) 219605529-219606857 retained_intron
ENST00000468584 (STK11IP-013) 219598194-219602709 processed_transcript
ENST00000473899 (STK11IP-014) 219608398-219609472 retained_intron
ENST00000475396 (STK11IP-002) 219598139-219609706 retained_intron
ENST00000475843 (STK11IP-015) 219597871-219601840 retained_intron
ENST00000483319 (STK11IP-007) 219609146-219610126 protein_coding
ENST00000494777 (STK11IP-010) 219614806-219616212 retained_intron
ENST00000495941 (STK11IP-008) 219613051-219614720 retained_intron
ENSG00000225911 (AC009310.1)
 ENST00000414414 (AC009310.1-001) 220048822-220049272 processed_pseudogene
ENSG00000227308 (AC009502.4)
 ENST00000416861 (AC009502.4-001) 219686987-219714686 lincRNA
ENST00000442416 (AC009502.4-003) 219730110-219737742 lincRNA
ENST00000606673 (AC009502.4-002) 219685492-219737937 lincRNA
ENST00000607654 (AC009502.4-004) 219685381-219687345 lincRNA
ENSG00000228909 (AC008281.1)
 ENST00000438659 (AC008281.1-001) 219904051-219904889 lincRNA
ENSG00000228973 (AC009955.8)
 ENST00000455896 (AC009955.8-001) 219625059-219626693 antisense
ENSG00000231802 (AC009502.1)
 ENST00000452903 (AC009502.1-001) 219684030-219684795 processed_pseudogene
ENSG00000239498 (AC114765.1)
 ENST00000432993 (AC114765.1-001) 220105656-220450778 lincRNA
ENSG00000267919 (RP11-256I23.3)
 ENST00000597288 (RP11-256I23.3-001) 219645090-219645631 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008ED_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1635 VISTA 10090 1:75532718-76135169
GeneTranscriptPositionBiotype
ENSMUSG00000006576 (Slc4a3)
solute carrier family 4 (anion exchanger), member 3 		ENSMUST00000027415 (Slc4a3-010) 75546496-75558890 nonsense_mediated_decay
ENSMUST00000124341 (Slc4a3-001) 75546266-75562172 protein_coding
ENSMUST00000129703 (Slc4a3-006) 75546296-75547507 retained_intron
ENSMUST00000132110 (Slc4a3-011) 75551709-75553732 nonsense_mediated_decay
ENSMUST00000132612 (Slc4a3-002) 75546644-75560881 retained_intron
ENSMUST00000138814 (Slc4a3-005) 75546533-75548011 protein_coding
ENSMUST00000142257 (Slc4a3-008) 75549768-75551129 retained_intron
ENSMUST00000145258 (Slc4a3-012) 75550595-75555125 nonsense_mediated_decay
ENSMUST00000145516 (Slc4a3-003) 75546527-75547744 retained_intron
ENSMUST00000150142 (Slc4a3-004) 75546462-75548038 protein_coding
ENSMUST00000154101 (Slc4a3-007) 75549599-75551382 protein_coding
ENSMUST00000189794 (Slc4a3-013) 75546656-75547534 retained_intron
ENSMUSG00000026213 (Stk11ip)
serine/threonine kinase 11 interacting protein 		ENSMUST00000027414 (Stk11ip-001) 75521529-75537335 protein_coding
ENSMUST00000113553 (Stk11ip-004) 75521552-75536932 protein_coding
ENSMUST00000129652 (Stk11ip-005) 75521811-75527112 retained_intron
ENSMUST00000129794 (Stk11ip-009) 75528305-75529483 retained_intron
ENSMUST00000140963 (Stk11ip-002) 75521791-75536935 retained_intron
ENSMUST00000146575 (Stk11ip-007) 75532531-75534253 retained_intron
ENSMUST00000150560 (Stk11ip-008) 75533038-75533784 processed_transcript
ENSMUST00000154303 (Stk11ip-006) 75529674-75532337 retained_intron
ENSMUST00000156838 (Stk11ip-003) 75528640-75536935 retained_intron
ENSMUSG00000082012 (Gm5257)
predicted gene 5257 		ENSMUST00000121823 (Gm5257-001) 75636390-75637179 processed_pseudogene
ENSMUSG00000083244 (Gm15180)
predicted gene 15180 		ENSMUST00000117745 (Gm15180-001) 75568083-75568574 processed_pseudogene
ENSMUSG00000099996 (RP24-103F2.1)
predicted gene 29065 		ENSMUST00000188786 (RP24-103F2.1-001) 76016658-76018756 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008ED_0001ENSG00000114923ENST00000273063ENST00000317151ENST00000358055ENST00000373760ENST00000416910ENST00000425141ENST00000444906ENST00000497589ENSG00000144589ENST00000295641ENST00000456909ENST00000459692ENST00000465230ENST00000466648ENST00000473899ENST00000475396ENST00000475843ENST00000483319ENST00000494777ENST00000495941ENSG00000225911ENST00000414414ENSG00000227308ENST00000416861ENST00000442416ENST00000606673ENST00000607654ENSG00000228909ENST00000438659ENSG00000228973ENST00000455896ENSG00000231802ENST00000452903ENSG00000239498ENST00000432993ENSG00000267919ENST00000597288CIL_0008ED_0002ENSMUSG00000006576ENSMUST00000027415ENSMUST00000124341ENSMUST00000132612ENSMUST00000142257ENSMUST00000145258ENSMUST00000145516ENSMUSG00000026213ENSMUST00000027414ENSMUST00000113553ENSMUST00000129794ENSMUST00000140963ENSMUST00000156838ENSMUSG00000082012ENSMUST00000121823ENSMUSG00000083244ENSMUST00000117745ENSMUSG00000099996ENSMUST00000188786
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114923 ENST00000273063 N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000317151 0.454±0.00 1.233±0.00 0.102±0.00 2.713±1.43 0.951±0.00 0.998±0.00 11.464±9.44 N/A 0.127±0.00 0.365±0.00 0.031±0.00 14.185±9.53 0.938±0.16 N/A
ENST00000358055 N/A 0.241±0.00 N/A N/A 0.492±0.00 N/A N/A 1.264±0.00 N/A N/A N/A 10.981±0.00 N/A 1.059±0.00
ENST00000373760 N/A N/A N/A 3.175±1.00 N/A N/A 9.665±5.21 N/A N/A N/A N/A N/A 0.917±0.00 4.170±0.00
ENST00000413743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416910 N/A N/A 0.532±0.00 N/A N/A N/A N/A N/A N/A 0.641±0.00 N/A N/A 0.591±0.00 N/A
ENST00000425141 N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A 0.022±0.00 N/A N/A 0.923±0.10 0.514±0.00 N/A
ENST00000444906 N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A 1.706±0.00 N/A N/A
ENST00000497589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A
ENSG00000144589 ENST00000295641 0.847±0.00 N/A N/A 0.634±0.58 1.838±1.62 1.189±0.00 0.652±0.54 3.581±0.00 0.642±0.53 1.017±0.93 0.953±0.78 4.247±4.91 3.805±2.14 2.457±0.00
ENST00000413891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456909 1.643±0.00 5.264±0.00 N/A 0.052±0.00 0.209±0.00 N/A 0.110±0.00 N/A 0.109±0.00 0.084±0.00 0.172±0.00 4.534±5.36 3.006±1.41 4.907±2.50
ENST00000459692 N/A N/A N/A N/A N/A N/A N/A N/A 0.285±0.00 N/A N/A N/A N/A N/A
ENST00000465230 N/A N/A N/A N/A N/A 0.665±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466648 N/A N/A 0.613±0.00 0.854±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473899 N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475396 N/A N/A 0.374±0.00 0.088±0.00 N/A 0.252±0.00 N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A
ENST00000475843 N/A N/A N/A N/A N/A N/A N/A 0.701±0.00 0.718±0.00 1.029±0.00 N/A N/A N/A N/A
ENST00000483319 N/A N/A N/A N/A N/A 1.828±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494777 N/A N/A N/A N/A N/A 1.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495941 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.338±0.00 N/A N/A N/A 21.962±0.00
ENSG00000225911 ENST00000414414 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.146±0.00 1.662±0.00 N/A N/A 0.151±0.00
ENSG00000227308 ENST00000416861 N/A N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENST00000442416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A
ENST00000606673 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A N/A N/A N/A
ENST00000607654 0.311±0.00 0.627±0.00 N/A 0.249±0.00 0.269±0.00 0.421±0.00 0.138±0.00 0.255±0.00 1.043±0.00 0.251±0.00 0.280±0.00 0.075±0.04 0.452±0.00 0.175±0.06
ENSG00000228909 ENST00000438659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 0.070±0.00 0.716±0.19
ENSG00000228973 ENST00000455896 N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A
ENSG00000231802 ENST00000452903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.052±0.00 0.031±0.02
ENSG00000239498 ENST00000432993 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A 0.089±0.06 N/A 0.076±0.03
ENSG00000267919 ENST00000597288 N/A N/A N/A 0.100±0.00 N/A N/A 0.912±0.00 N/A N/A N/A N/A 0.208±0.02 0.221±0.12 0.935±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006576 ENSMUST00000027415 N/A N/A N/A 30.727±0.00 0.565±0.00 1.753±0.03 33.493±0.00 N/A 0.124±0.10 N/A 1.185±0.34 6.427±2.18 1.228±0.77 N/A
ENSMUST00000124341 0.499±0.00 9.857±0.00 0.883±0.00 1.780±0.00 0.828±0.29 0.448±0.00 6.000±1.43 N/A 0.087±0.02 1.446±0.09 N/A 4.382±0.59 N/A 0.775±0.24
ENSMUST00000129703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132612 2.008±0.96 24.793±4.57 2.396±0.44 8.135±4.90 1.021±0.19 1.579±0.44 10.588±5.84 1.119±0.39 0.162±0.08 1.732±0.24 0.426±0.09 4.894±1.58 0.722±0.60 0.824±0.19
ENSMUST00000138814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.999±0.00
ENSMUST00000145258 N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.10 N/A 1.225±0.00 5.549±0.00 0.339±0.00 N/A
ENSMUST00000145516 N/A N/A N/A N/A N/A N/A N/A N/A 0.285±0.08 N/A N/A N/A N/A N/A
ENSMUST00000150142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026213 ENSMUST00000027414 N/A N/A 0.799±0.00 N/A N/A N/A N/A 0.689±0.05 0.686±0.22 N/A 0.542±0.06 N/A 1.645±0.54 N/A
ENSMUST00000113553 4.965±1.92 6.853±1.24 3.359±0.59 5.594±2.32 8.856±1.17 6.672±1.12 2.324±0.79 4.632±1.07 2.374±0.79 8.927±0.85 2.157±0.52 10.723±4.63 5.550±2.00 5.492±0.41
ENSMUST00000129652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129794 N/A N/A N/A 9.158±0.00 N/A N/A N/A N/A N/A N/A N/A 26.739±0.00 17.555±2.46 42.526±0.00
ENSMUST00000140963 2.935±0.38 4.580±1.09 1.786±0.22 2.122±1.06 3.422±0.96 2.207±0.32 0.756±0.36 1.419±0.54 0.805±0.32 4.192±0.00 0.732±0.20 4.880±1.27 2.592±1.99 2.492±0.89
ENSMUST00000146575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156838 N/A N/A 2.766±0.00 1.958±0.66 N/A N/A N/A N/A 0.692±0.00 2.425±0.00 0.847±0.06 2.615±0.71 0.988±0.00 N/A
ENSMUSG00000082012 ENSMUST00000121823 0.168±0.06 N/A 0.015±0.01 0.006±0.01 0.056±0.00 N/A N/A 0.048±0.00 0.007±0.00 0.148±0.00 N/A 0.330±0.12 0.509±0.37 N/A
ENSMUSG00000083244 ENSMUST00000117745 N/A N/A N/A N/A 0.313±0.00 N/A 0.087±0.00 N/A N/A N/A N/A 0.085±0.00 N/A N/A
ENSMUSG00000099996 ENSMUST00000188786 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.14 N/A N/A N/A 0.015±0.00 N/A

Loading