C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008ED_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1635 VISTA 9606 2:219606364-220208558
GeneTranscriptPositionBiotype
ENSG00000114923 (SLC4A3)
solute carrier family 4 (anion exchanger), member 3 		ENST00000273063 (SLC4A3-001) 219627565-219641980 protein_coding
ENST00000317151 (SLC4A3-002) 219627661-219641980 protein_coding
ENST00000358055 (SLC4A3-009) 219627327-219641971 protein_coding
ENST00000373760 (SLC4A3-010) 219627394-219641971 protein_coding
ENST00000413743 (SLC4A3-008) 219631130-219633009 protein_coding
ENST00000416910 (SLC4A3-011) 219632059-219637795 nonsense_mediated_decay
ENST00000425141 (SLC4A3-004) 219627627-219641728 nonsense_mediated_decay
ENST00000444906 (SLC4A3-005) 219633346-219635781 nonsense_mediated_decay
ENST00000497589 (SLC4A3-003) 219628516-219632418 processed_transcript
ENSG00000144589 (STK11IP)
serine/threonine kinase 11 interacting protein 		ENST00000295641 (STK11IP-201) 219597874-219616451 protein_coding
ENST00000413891 (STK11IP-009) 219612043-219615202 nonsense_mediated_decay
ENST00000447191 (STK11IP-011) 219613916-219615995 protein_coding
ENST00000456857 (STK11IP-004) 219598094-219602083 nonsense_mediated_decay
ENST00000456909 (STK11IP-001) 219597860-219616451 protein_coding
ENST00000459692 (STK11IP-003) 219598443-219606058 processed_transcript
ENST00000465230 (STK11IP-005) 219605507-219606633 retained_intron
ENST00000466648 (STK11IP-006) 219605529-219606857 retained_intron
ENST00000468584 (STK11IP-013) 219598194-219602709 processed_transcript
ENST00000473899 (STK11IP-014) 219608398-219609472 retained_intron
ENST00000475396 (STK11IP-002) 219598139-219609706 retained_intron
ENST00000475843 (STK11IP-015) 219597871-219601840 retained_intron
ENST00000483319 (STK11IP-007) 219609146-219610126 protein_coding
ENST00000494777 (STK11IP-010) 219614806-219616212 retained_intron
ENST00000495941 (STK11IP-008) 219613051-219614720 retained_intron
ENSG00000225911 (AC009310.1)
 ENST00000414414 (AC009310.1-001) 220048822-220049272 processed_pseudogene
ENSG00000227308 (AC009502.4)
 ENST00000416861 (AC009502.4-001) 219686987-219714686 lincRNA
ENST00000442416 (AC009502.4-003) 219730110-219737742 lincRNA
ENST00000606673 (AC009502.4-002) 219685492-219737937 lincRNA
ENST00000607654 (AC009502.4-004) 219685381-219687345 lincRNA
ENSG00000228909 (AC008281.1)
 ENST00000438659 (AC008281.1-001) 219904051-219904889 lincRNA
ENSG00000228973 (AC009955.8)
 ENST00000455896 (AC009955.8-001) 219625059-219626693 antisense
ENSG00000231802 (AC009502.1)
 ENST00000452903 (AC009502.1-001) 219684030-219684795 processed_pseudogene
ENSG00000239498 (AC114765.1)
 ENST00000432993 (AC114765.1-001) 220105656-220450778 lincRNA
ENSG00000267919 (RP11-256I23.3)
 ENST00000597288 (RP11-256I23.3-001) 219645090-219645631 lincRNA
CIL_0008ED_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1635 VISTA 10090 1:75532718-76135169
GeneTranscriptPositionBiotype
ENSMUSG00000006576 (Slc4a3)
solute carrier family 4 (anion exchanger), member 3 		ENSMUST00000027415 (Slc4a3-010) 75546496-75558890 nonsense_mediated_decay
ENSMUST00000124341 (Slc4a3-001) 75546266-75562172 protein_coding
ENSMUST00000129703 (Slc4a3-006) 75546296-75547507 retained_intron
ENSMUST00000132110 (Slc4a3-011) 75551709-75553732 nonsense_mediated_decay
ENSMUST00000132612 (Slc4a3-002) 75546644-75560881 retained_intron
ENSMUST00000138814 (Slc4a3-005) 75546533-75548011 protein_coding
ENSMUST00000142257 (Slc4a3-008) 75549768-75551129 retained_intron
ENSMUST00000145258 (Slc4a3-012) 75550595-75555125 nonsense_mediated_decay
ENSMUST00000145516 (Slc4a3-003) 75546527-75547744 retained_intron
ENSMUST00000150142 (Slc4a3-004) 75546462-75548038 protein_coding
ENSMUST00000154101 (Slc4a3-007) 75549599-75551382 protein_coding
ENSMUST00000189794 (Slc4a3-013) 75546656-75547534 retained_intron
ENSMUSG00000026213 (Stk11ip)
serine/threonine kinase 11 interacting protein 		ENSMUST00000027414 (Stk11ip-001) 75521529-75537335 protein_coding
ENSMUST00000113553 (Stk11ip-004) 75521552-75536932 protein_coding
ENSMUST00000129652 (Stk11ip-005) 75521811-75527112 retained_intron
ENSMUST00000129794 (Stk11ip-009) 75528305-75529483 retained_intron
ENSMUST00000140963 (Stk11ip-002) 75521791-75536935 retained_intron
ENSMUST00000146575 (Stk11ip-007) 75532531-75534253 retained_intron
ENSMUST00000150560 (Stk11ip-008) 75533038-75533784 processed_transcript
ENSMUST00000154303 (Stk11ip-006) 75529674-75532337 retained_intron
ENSMUST00000156838 (Stk11ip-003) 75528640-75536935 retained_intron
ENSMUSG00000082012 (Gm5257)
predicted gene 5257 		ENSMUST00000121823 (Gm5257-001) 75636390-75637179 processed_pseudogene
ENSMUSG00000083244 (Gm15180)
predicted gene 15180 		ENSMUST00000117745 (Gm15180-001) 75568083-75568574 processed_pseudogene
ENSMUSG00000099996 (RP24-103F2.1)
predicted gene 29065 		ENSMUST00000188786 (RP24-103F2.1-001) 76016658-76018756 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008ED_0001ENSG00000114923ENST00000273063ENST00000317151ENST00000358055ENST00000373760ENST00000416910ENST00000425141ENST00000444906ENST00000497589ENSG00000144589ENST00000295641ENST00000456909ENST00000459692ENST00000465230ENST00000466648ENST00000473899ENST00000475396ENST00000475843ENST00000483319ENST00000494777ENST00000495941ENSG00000225911ENST00000414414ENSG00000227308ENST00000416861ENST00000442416ENST00000606673ENST00000607654ENSG00000228909ENST00000438659ENSG00000228973ENST00000455896ENSG00000231802ENST00000452903ENSG00000239498ENST00000432993ENSG00000267919ENST00000597288CIL_0008ED_0002ENSMUSG00000006576ENSMUST00000027415ENSMUST00000124341ENSMUST00000132612ENSMUST00000142257ENSMUST00000145258ENSMUST00000145516ENSMUSG00000026213ENSMUST00000027414ENSMUST00000113553ENSMUST00000129794ENSMUST00000140963ENSMUST00000156838ENSMUSG00000082012ENSMUST00000121823ENSMUSG00000083244ENSMUST00000117745ENSMUSG00000099996ENSMUST00000188786
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114923 ENST00000273063 N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000317151 0.454±0.00 1.233±0.00 0.102±0.00 2.713±1.43 0.951±0.00 0.998±0.00 11.464±9.44 N/A 0.127±0.00 0.365±0.00 0.031±0.00 14.185±9.53 0.938±0.16 N/A
ENST00000358055 N/A 0.241±0.00 N/A N/A 0.492±0.00 N/A N/A 1.264±0.00 N/A N/A N/A 10.981±0.00 N/A 1.059±0.00
ENST00000373760 N/A N/A N/A 3.175±1.00 N/A N/A 9.665±5.21 N/A N/A N/A N/A N/A 0.917±0.00 4.170±0.00
ENST00000413743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416910 N/A N/A 0.532±0.00 N/A N/A N/A N/A N/A N/A 0.641±0.00 N/A N/A 0.591±0.00 N/A
ENST00000425141 N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A 0.022±0.00 N/A N/A 0.923±0.10 0.514±0.00 N/A
ENST00000444906 N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A 1.706±0.00 N/A N/A
ENST00000497589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A
ENSG00000144589 ENST00000295641 0.847±0.00 N/A N/A 0.634±0.58 1.838±1.62 1.189±0.00 0.652±0.54 3.581±0.00 0.642±0.53 1.017±0.93 0.953±0.78 4.247±4.91 3.805±2.14 2.457±0.00
ENST00000413891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456909 1.643±0.00 5.264±0.00 N/A 0.052±0.00 0.209±0.00 N/A 0.110±0.00 N/A 0.109±0.00 0.084±0.00 0.172±0.00 4.534±5.36 3.006±1.41 4.907±2.50
ENST00000459692 N/A N/A N/A N/A N/A N/A N/A N/A 0.285±0.00 N/A N/A N/A N/A N/A
ENST00000465230 N/A N/A N/A N/A N/A 0.665±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466648 N/A N/A 0.613±0.00 0.854±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473899 N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475396 N/A N/A 0.374±0.00 0.088±0.00 N/A 0.252±0.00 N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A
ENST00000475843 N/A N/A N/A N/A N/A N/A N/A 0.701±0.00 0.718±0.00 1.029±0.00 N/A N/A N/A N/A
ENST00000483319 N/A N/A N/A N/A N/A 1.828±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494777 N/A N/A N/A N/A N/A 1.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495941 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.338±0.00 N/A N/A N/A 21.962±0.00
ENSG00000225911 ENST00000414414 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.146±0.00 1.662±0.00 N/A N/A 0.151±0.00
ENSG00000227308 ENST00000416861 N/A N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00
ENST00000442416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A
ENST00000606673 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A N/A N/A N/A
ENST00000607654 0.311±0.00 0.627±0.00 N/A 0.249±0.00 0.269±0.00 0.421±0.00 0.138±0.00 0.255±0.00 1.043±0.00 0.251±0.00 0.280±0.00 0.075±0.04 0.452±0.00 0.175±0.06
ENSG00000228909 ENST00000438659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 0.070±0.00 0.716±0.19
ENSG00000228973 ENST00000455896 N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A
ENSG00000231802 ENST00000452903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.052±0.00 0.031±0.02
ENSG00000239498 ENST00000432993 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A 0.089±0.06 N/A 0.076±0.03
ENSG00000267919 ENST00000597288 N/A N/A N/A 0.100±0.00 N/A N/A 0.912±0.00 N/A N/A N/A N/A 0.208±0.02 0.221±0.12 0.935±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006576 ENSMUST00000027415 N/A N/A N/A 30.727±0.00 0.565±0.00 1.753±0.03 33.493±0.00 N/A 0.124±0.10 N/A 1.185±0.34 6.427±2.18 1.228±0.77 N/A
ENSMUST00000124341 0.499±0.00 9.857±0.00 0.883±0.00 1.780±0.00 0.828±0.29 0.448±0.00 6.000±1.43 N/A 0.087±0.02 1.446±0.09 N/A 4.382±0.59 N/A 0.775±0.24
ENSMUST00000129703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132612 2.008±0.96 24.793±4.57 2.396±0.44 8.135±4.90 1.021±0.19 1.579±0.44 10.588±5.84 1.119±0.39 0.162±0.08 1.732±0.24 0.426±0.09 4.894±1.58 0.722±0.60 0.824±0.19
ENSMUST00000138814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.999±0.00
ENSMUST00000145258 N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.10 N/A 1.225±0.00 5.549±0.00 0.339±0.00 N/A
ENSMUST00000145516 N/A N/A N/A N/A N/A N/A N/A N/A 0.285±0.08 N/A N/A N/A N/A N/A
ENSMUST00000150142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026213 ENSMUST00000027414 N/A N/A 0.799±0.00 N/A N/A N/A N/A 0.689±0.05 0.686±0.22 N/A 0.542±0.06 N/A 1.645±0.54 N/A
ENSMUST00000113553 4.965±1.92 6.853±1.24 3.359±0.59 5.594±2.32 8.856±1.17 6.672±1.12 2.324±0.79 4.632±1.07 2.374±0.79 8.927±0.85 2.157±0.52 10.723±4.63 5.550±2.00 5.492±0.41
ENSMUST00000129652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129794 N/A N/A N/A 9.158±0.00 N/A N/A N/A N/A N/A N/A N/A 26.739±0.00 17.555±2.46 42.526±0.00
ENSMUST00000140963 2.935±0.38 4.580±1.09 1.786±0.22 2.122±1.06 3.422±0.96 2.207±0.32 0.756±0.36 1.419±0.54 0.805±0.32 4.192±0.00 0.732±0.20 4.880±1.27 2.592±1.99 2.492±0.89
ENSMUST00000146575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156838 N/A N/A 2.766±0.00 1.958±0.66 N/A N/A N/A N/A 0.692±0.00 2.425±0.00 0.847±0.06 2.615±0.71 0.988±0.00 N/A
ENSMUSG00000082012 ENSMUST00000121823 0.168±0.06 N/A 0.015±0.01 0.006±0.01 0.056±0.00 N/A N/A 0.048±0.00 0.007±0.00 0.148±0.00 N/A 0.330±0.12 0.509±0.37 N/A
ENSMUSG00000083244 ENSMUST00000117745 N/A N/A N/A N/A 0.313±0.00 N/A 0.087±0.00 N/A N/A N/A N/A 0.085±0.00 N/A N/A
ENSMUSG00000099996 ENSMUST00000188786 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.14 N/A N/A N/A 0.015±0.00 N/A

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