| Transcript ID | Brain | Kidney |
|---|---|---|
| ENSDART00000083256 | 0.214±0.06 | 0.069±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sodium channel, voltage gated, type XII, alpha a | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000083256  |
scn12aa-201 |
ENSDARG00000059692 |
7955 | + |
2:51470415-51506531  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001518 | IEA | voltage-gated sodium channel complex |
| GO:0001947 | IMP | heart looping |
| GO:0003007 | IMP | heart morphogenesis |
| GO:0005216 | IEA | ion channel activity |
| GO:0005244 | IEA | voltage-gated ion channel activity |
| GO:0005248 | IEA | voltage-gated sodium channel activity |
| GO:0005272 | IEA | sodium channel activity |
| GO:0005515 | IEA | protein binding |
| GO:0006810 | IEA | transport |
| GO:0006811 | IEA | ion transport |
| GO:0006814 | IEA | sodium ion transport |
| GO:0008016 | IMP | regulation of heart contraction |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral to membrane |
| GO:0034765 | IEA | regulation of ion transmembrane transport |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028377
|
Scn2a1-001 | protein_coding | Mus_musculus | 0 | 811 |
|
ENSMUST00000077489
|
Scn1a-004 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000094951
|
Scn1a-005 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000100063
|
Scn9a-201 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000100064
|
Scn9a-001 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000100067
|
Scn2a1-201 | protein_coding | Mus_musculus | 0 | 811 |
|
ENSMUST00000112354
|
Scn9a-002 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000112366
|
Scn1a-001 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000112371
|
Scn1a-201 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000156865
|
Scn1a-003 | processed_transcript | Mus_musculus | 0 | 375 |
|
ENSMUST00000164384
|
Scn9a-202 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000169900
|
Scn9a-203 | protein_coding | Mus_musculus | 0 | 760 |
|
ENST00000283254
|
SCN3A-001 | protein_coding | Homo_sapiens | 0 | 647 |
|
ENST00000360093
|
SCN3A-201 | protein_coding | Homo_sapiens | 0 | 647 |
|
ENST00000409101
|
SCN3A-002 | protein_coding | Homo_sapiens | 0 | 647 |
|
ENST00000435607
|
SCN4A-201 | protein_coding | Homo_sapiens | 0 | 889 |
|
ENST00000578147
|
SCN4A-001 | protein_coding | Homo_sapiens | 0 | 889 |
