C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synaptotagmin binding, cytoplasmic RNA interacting protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000132186  |
syncrip-002 |
ENSDARG00000040184 |
7955 | + |
20:2760657-2768361  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006BO | CIL_0006BO_0001 | CGP | 20:2760603-2892049 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000302271
|
HNRNPR-001 | protein_coding | Homo_sapiens | 0 | 422 |
|
ENST00000355238
|
SYNCRIP-002 | protein_coding | Homo_sapiens | 0 | 547 |
|
ENST00000369622
|
SYNCRIP-001 | protein_coding | Homo_sapiens | 0 | 547 |
|
ENST00000374612
|
HNRNPR-003 | protein_coding | Homo_sapiens | 0 | 422 |
|
ENST00000374616
|
HNRNPR-002 | protein_coding | Homo_sapiens | 0 | 379 |
|
ENST00000427764
|
HNRNPR-201 | protein_coding | Homo_sapiens | 4e-24 | 117 |
|
ENST00000434910
|
RP4-775C13.1-001 | processed_pseudogene | Homo_sapiens | 0 | 477 |
|
ENST00000444272
|
SYNCRIP-003 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000453465
|
HNRNPRP1-001 | processed_pseudogene | Homo_sapiens | 0 | 259 |
|
ENST00000463552
|
HNRNPR-010 | processed_transcript | Homo_sapiens | 9e-23 | 111 |
|
ENST00000476451
|
HNRNPR-008 | processed_transcript | Homo_sapiens | 0 | 405 |
|
ENST00000478691
|
HNRNPR-004 | protein_coding | Homo_sapiens | 0 | 379 |
|
ENST00000606561
|
HNRNPR-011 | protein_coding | Homo_sapiens | 4e-24 | 117 |
|
ENST00000616122
|
SYNCRIP-201 | protein_coding | Homo_sapiens | 0 | 545 |
