C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432100 KRT8P30-001 ENSG00000224928 9606 - 2:218953401-218954050 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonPlacentaTestisENST00000432100
Transcript ID Brain Colon Placenta Testis
ENST00000432100 0.387±0.00 0.081±0.00 0.185±0.00 0.255±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001I8 CIL_0001I8_0002 CGP 2:218880363-218962162

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 4e-30 135
ENSMUST00000148248 Vim-004 retained_intron Mus_musculus 7e-18 95
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 7e-18 95
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0.00000000000001 84
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 0.00000000000005 82
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 0.00000000000005 82
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0.00000000003 73
ENSDART00000137533 krt8-003 retained_intron Danio_rerio 0.000000001 68
ENSDART00000081215 krt8-001 protein_coding Danio_rerio 0.000000001 68

Loading