C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546583 KRT8-005 ENSG00000170421 9606 - 12:52897208-52905052 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954
CIL_0006T8 CIL_0006T8_0001 CGP 12:52897187-52952901

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 926
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 442
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 403
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 387
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 387
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 305
ENSDART00000081215 krt8-001 protein_coding Danio_rerio 0 265
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0 250
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 5e-40 171
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 3e-37 161
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 3e-37 161
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 1e-35 156
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 1e-35 156
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 1e-35 156
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 5e-35 154
ENSDART00000137533 krt8-003 retained_intron Danio_rerio 7e-24 117
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 3e-22 111
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 3e-22 111
ENSMUST00000148248 Vim-004 retained_intron Mus_musculus 3e-22 111
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 3e-22 111
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.000001 60

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