C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5321
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072050 Gm5321-001 ENSMUSG00000064231 10090 + 7:6019022-6019468 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaTestisENSMUST00000072050
Transcript ID Liver Ovary Placenta Testis
ENSMUST00000072050 0.085±0.05 0.165±0.00 0.124±0.00 0.152±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017975 rps18-001 protein_coding Danio_rerio 0 243
ENSDART00000143134 rps18-003 protein_coding Danio_rerio 0 239
ENSDART00000142769 rps18-002 protein_coding Danio_rerio 0 237
ENSDART00000131839 rps18-005 protein_coding Danio_rerio 3.9937e-43 178
ENSDART00000134350 rps18-004 retained_intron Danio_rerio 1.99965e-42 176
ENST00000211372 RPS18-001 protein_coding Homo_sapiens 0 490
ENST00000412454 RPS18P12-001 processed_pseudogene Homo_sapiens 0 435
ENST00000434122 RPS18-001 protein_coding Homo_sapiens 0 490
ENST00000439602 RPS18-001 protein_coding Homo_sapiens 0 490
ENST00000440980 RPS18-001 protein_coding Homo_sapiens 2e-38 161
ENST00000454021 RPS18-001 protein_coding Homo_sapiens 0 490
ENST00000457341 RPS18-001 protein_coding Homo_sapiens 0 490
ENST00000459882 RPS18-002 processed_transcript Homo_sapiens 0 486
ENST00000461260 RPS18P13-001 processed_pseudogene Homo_sapiens 0 379
ENST00000461584 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000463232 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000464447 RPS18-007 retained_intron Homo_sapiens 0 431
ENST00000464602 RPS18-004 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000470276 RPS18-003 processed_transcript Homo_sapiens 0 335
ENST00000470852 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000472218 RPS18-004 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000472979 RPS18-007 retained_intron Homo_sapiens 0 431
ENST00000473242 RPS18-006 retained_intron Homo_sapiens 0 337
ENST00000473705 RPS18-005 retained_intron Homo_sapiens 8e-37 158
ENST00000474626 RPS18-006 retained_intron Homo_sapiens 0 337
ENST00000474973 RPS18-002 protein_coding Homo_sapiens 0 486
ENST00000475634 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000476222 RPS18-003 processed_transcript Homo_sapiens 0 335
ENST00000476288 RPS18-003 protein_coding Homo_sapiens 0 335
ENST00000476337 RPS18-002 processed_transcript Homo_sapiens 0 486
ENST00000477055 RPS18-002 protein_coding Homo_sapiens 0 486
ENST00000477273 RPS18-006 retained_intron Homo_sapiens 0 337
ENST00000477787 RPS18-007 retained_intron Homo_sapiens 0 431
ENST00000481330 RPS18-006 retained_intron Homo_sapiens 0 337
ENST00000482391 RPS18-007 retained_intron Homo_sapiens 0 431
ENST00000482698 RPS18-004 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000482817 RPS18P9-001 processed_pseudogene Homo_sapiens 0 409
ENST00000484321 RPS18-003 protein_coding Homo_sapiens 0 335
ENST00000485674 RPS18-004 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000486781 RPS18-002 protein_coding Homo_sapiens 0 486
ENST00000489474 RPS18-004 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000490191 RPS18-005 retained_intron Homo_sapiens 0 486
ENST00000490380 RPS18-006 retained_intron Homo_sapiens 0 337
ENST00000494232 RPS18-003 protein_coding Homo_sapiens 0 335
ENST00000495909 CTD-2061E19.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000496294 RP11-234A1.1-001 processed_pseudogene Homo_sapiens 0 462
ENST00000496813 RPS18-007 retained_intron Homo_sapiens 0 431
ENST00000497078 RPS18-002 processed_transcript Homo_sapiens 2e-37 158

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