C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31 pseudogene 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431058 RPL31P35-001 ENSG00000232612 9606 + 7:54656358-54656734 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungMuscleENST00000431058
Transcript ID Adrenal Brain Breast Colon Lung Muscle
ENST00000431058 0.133±0.00 0.047±0.00 0.045±0.00 0.042±0.00 0.212±0.00 0.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LU CIL_0006LU_0001 CGP 7:54542325-54759974

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 414
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 414
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 414
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000116034 Rpl31-ps10-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000180885 Rpl31-ps18-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 364
ENSMUST00000180629 Rpl31-ps7-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000079114 Rpl31-ps4-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000117961 Rpl31-ps22-001 processed_pseudogene Mus_musculus 0 243

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