C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000167586 KRT14-001 ENSG00000186847 9606 - 17:41582279-41586921 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000167586
Transcript ID Adipose Bladder Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000167586 6.152±0.00 0.477±0.00 88.233±80.79 0.025±0.00 0.385±0.35 1.411±0.85 0.079±0.00 117.335±140.75 52.133±47.38 0.360±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TM CIL_0000TM_0004 CGP 17:41565841-41586921
CIL_00056U CIL_00056U_000N CGP 17:41582279-41615899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005882 IDA:IEA intermediate filament
GO:0007568 IDA aging
GO:0008544 TAS epidermis development
GO:0010043 IEA response to zinc ion
GO:0010212 IEA response to ionizing radiation
GO:0030855 IEA epithelial cell differentiation
GO:0031581 TAS hemidesmosome assembly
GO:0034329 TAS cell junction assembly
GO:0042633 IDA hair cycle
GO:0045095 IDA keratin filament
GO:0045110 IMP intermediate filament bundle assembly
GO:0070062 IDA extracellular vesicular exosome
GO:0071944 IEA cell periphery
GO:1990254 IPI keratin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 1681
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 1245
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 1120
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 1101
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 1002
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 732
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 603
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 547
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 534
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 518
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 405
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 0 206
ENSMUST00000017743 Krt20-001 protein_coding Mus_musculus 1e-29 135
ENSMUST00000100482 Krt26-001 protein_coding Mus_musculus 5e-28 130
ENSMUST00000148770 Krt26-002 processed_transcript Mus_musculus 5e-23 113

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