C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577817 KRT17-005 ENSG00000128422 9606 - 17:41621627-41624464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryENST00000577817
Transcript ID Bladder Ovary
ENST00000577817 0.124±0.00 15.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000M CGP 17:41609778-41624842
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 538
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 316
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 316
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 230
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 198
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 9.80909e-45 183
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 9.80909e-45 183
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 4e-35 152
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 4e-25 119
ENSMUST00000100482 Krt26-001 protein_coding Mus_musculus 2e-23 113
ENSMUST00000148770 Krt26-002 processed_transcript Mus_musculus 2e-23 113

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