C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393976 KRT15-007 ENSG00000171346 9606 - 17:41513746-41521719 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000393976
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000393976 0.138±0.00 0.027±0.00 0.095±0.08 40.376±37.53 0.168±0.00 0.009±0.00 0.237±0.02 3.531±0.00 25.449±31.55 0.129±0.01 0.363±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000I CGP 17:41500981-41522529
CIL_00056U CIL_00056U_000G CGP 17:41513743-41528308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005882 IEA intermediate filament
GO:0008544 TAS epidermis development
GO:0070062 IDA extracellular vesicular exosome
GO:0097110 IPI scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 1458
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 952
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 767
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 678
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 662
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 617
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 542
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 527
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 503
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 0 412
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 398
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 357
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 298
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 0 279
ENSMUST00000017741 Krt12-001 protein_coding Mus_musculus 0 233
ENSMUST00000100482 Krt26-001 protein_coding Mus_musculus 3e-31 141
ENSMUST00000148770 Krt26-002 processed_transcript Mus_musculus 5e-24 117

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