Transcript ID | Lung | Ovary | Placenta |
---|---|---|---|
ENST00000451604 | 0.498±0.00 | 0.164±0.00 | 0.436±0.00 |
Transcript Info |
||||||
Description: | SRY (sex determining region Y)-box 5 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000451604 | SOX5-002 | ENSG00000134532 | 9606 | - | 12:23532352-23949703 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0006Y0 | CIL_0006Y0_0002 | CGP | 12:22625075-23951032 |
CIL_0007NR | CIL_0007NR_0001 | UCNEbase | 12:22767069-24538480 |
CIL_0004XB | CIL_0004XB_0001 | CGP | 12:23529500-24949459 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000981 | IEA | sequence-specific DNA binding RNA polymerase II transcription factor activity |
GO:0001701 | IEA | in utero embryonic development |
GO:0003677 | IEA | DNA binding |
GO:0003700 | TAS | sequence-specific DNA binding transcription factor activity |
GO:0005515 | IPI | protein binding |
GO:0005634 | IEA | nucleus |
GO:0006366 | IEA | transcription from RNA polymerase II promoter |
GO:0021953 | IEA | central nervous system neuron differentiation |
GO:0032332 | IDA | positive regulation of chondrocyte differentiation |
GO:0044212 | IEA | transcription regulatory region DNA binding |
GO:0044798 | IEA | nuclear transcription factor complex |
GO:0045165 | IEA | cell fate commitment |
GO:0045892 | IEA | negative regulation of transcription, DNA-templated |
GO:0045944 | IEA | positive regulation of transcription from RNA polymerase II promoter |
GO:0046982 | IEA | protein heterodimerization activity |
GO:0048709 | IEA | oligodendrocyte differentiation |
GO:0051216 | IEA | cartilage development |
GO:0060164 | IEA | regulation of timing of neuron differentiation |
GO:0061036 | IDA | positive regulation of cartilage development |
GO:0071560 | IDA | cellular response to transforming growth factor beta stimulus |
GO:2000741 | IDA | positive regulation of mesenchymal stem cell differentiation |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000038815 | Sox5-001 | protein_coding | Mus_musculus | 0 | 3640 |
ENSMUST00000170367 | Sox5-201 | protein_coding | Mus_musculus | 0 | 1908 |
ENSMUST00000111749 | Sox5-005 | protein_coding | Mus_musculus | 0 | 1908 |
ENSMUST00000077160 | Sox5-002 | protein_coding | Mus_musculus | 0 | 1908 |
ENSMUST00000111748 | Sox5-003 | protein_coding | Mus_musculus | 0 | 1908 |
ENSMUST00000141102 | Sox5-009 | retained_intron | Mus_musculus | 0 | 1314 |
ENSMUST00000142294 | Sox5-006 | retained_intron | Mus_musculus | 0 | 1234 |
ENSMUST00000129050 | Sox5-007 | retained_intron | Mus_musculus | 0 | 1177 |
ENSMUST00000111746 | Sox5-004 | processed_transcript | Mus_musculus | 0 | 815 |
ENSMUST00000144289 | Sox5-013 | protein_coding | Mus_musculus | 0 | 808 |
ENSMUST00000124233 | Sox5-010 | protein_coding | Mus_musculus | 0 | 662 |
ENSMUST00000150087 | Sox5-011 | retained_intron | Mus_musculus | 0 | 564 |
ENSDART00000100998 | sox6-201 | protein_coding | Danio_rerio | 0 | 270 |
ENSDART00000150068 | sox6-001 | protein_coding | Danio_rerio | 0 | 270 |
ENSMUST00000149451 | Sox5-008 | processed_transcript | Mus_musculus | 0 | 268 |
ENSMUST00000139478 | Sox5-012 | processed_transcript | Mus_musculus | 0 | 233 |
ENSDART00000006737 | sox5-201 | protein_coding | Danio_rerio | 2e-35 | 156 |
ENSDART00000134595 | sox5-001 | protein_coding | Danio_rerio | 3e-33 | 148 |