C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13870
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117214 Gm13870-001 ENSMUSG00000081447 10090 + 2:104537437-104538459 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverTestisENSMUST00000117214
Transcript ID Adipose Liver Testis
ENSMUST00000117214 0.028±0.00 0.011±0.00 0.183±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 874
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 640
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 854
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 874
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 874
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 671
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 623
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 712
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 597
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 601
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 793
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 634
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 520
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 405
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 614
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 619
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 568
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 394
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 444
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 536
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 472
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 640
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 640
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 381
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 604
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 617
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 651
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 239
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 213
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 652
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 520
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 756

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